Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 NFU1P2-201ENST00000448700 469 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 AC104806.1-201ENST00000508720 308 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.45□□□□□ -2.18
CDX2Q99626 RNU6-667P-201ENST00000517186 102 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.45□□□□□ -2.18
CDX2Q99626 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.45□□□□□ -2.18
CDX2Q99626 AP000763.2-201ENST00000540641 163 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.45□□□□□ -2.18
CDX2Q99626 AL391840.1-201ENST00000571144 367 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 AL078605.1-201ENST00000603529 500 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 SNRPGP17-201ENST00000603780 214 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 AP000907.4-201ENST00000604143 237 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 Z82243.1-201ENST00000609432 473 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 U4.7-201ENST00000638126 106 ntBASIC1.45□□□□□ -2.18
CDX2Q99626 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDX2Q99626 Y_RNA.1-201ENST00000352915 104 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 Y_RNA.6-201ENST00000362350 114 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNU6-1097P-201ENST00000363586 107 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNA5SP457-201ENST00000363657 124 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 Y_RNA.296-201ENST00000364930 108 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNU4-12P-201ENST00000365233 139 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNU5A-6P-201ENST00000384136 116 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNU6-611P-201ENST00000384276 104 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNY3P14-201ENST00000384309 102 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RNU6-45P-201ENST00000384471 107 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 MIR1262-201ENST00000408276 93 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 RPL30P16-201ENST00000419341 429 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AC244636.1-201ENST00000421152 228 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 PIGFP2-201ENST00000421400 651 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.44□□□□□ -2.18
CDX2Q99626 AL606489.2-201ENST00000433886 234 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 MTND1P1-201ENST00000445453 368 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.44□□□□□ -2.18
CDX2Q99626 AC006026.2-201ENST00000457376 180 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AL162395.1-201ENST00000457882 422 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AC006512.1-201ENST00000468816 291 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.44□□□□□ -2.18
CDX2Q99626 AC104136.1-201ENST00000512969 394 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.44□□□□□ -2.18
CDX2Q99626 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.44□□□□□ -2.18
CDX2Q99626 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.44□□□□□ -2.18
CDX2Q99626 SUB1P2-201ENST00000556401 297 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 MTCO3P23-201ENST00000561363 289 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 MIR5000-201ENST00000577717 103 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 MIR5692A1-201ENST00000580523 69 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 MIR5583-1-201ENST00000580941 59 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AC091135.1-201ENST00000585943 307 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.44□□□□□ -2.18
CDX2Q99626 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.44□□□□□ -2.18
CDX2Q99626 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AL359880.1-201ENST00000621879 266 ntBASIC1.44□□□□□ -2.18
CDX2Q99626 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.44□□□□□ -2.18
CDX2Q99626 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDX2Q99626 RNU6-1103P-201ENST00000384150 107 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 Y_RNA.450-201ENST00000384198 113 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 Y_RNA.458-201ENST00000384240 102 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 RNU6-456P-201ENST00000384493 107 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AL590002.1-201ENST00000406554 418 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 RNU6-1068P-201ENST00000410958 103 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 RNU6-1148P-201ENST00000410992 104 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 RPS20P15-201ENST00000412792 311 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 MTCYBP8-201ENST00000422855 651 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC133104.1-201ENST00000429100 218 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 MRPS10P2-201ENST00000431226 381 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC002486.1-201ENST00000435098 391 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 MTATP6P13-201ENST00000438531 667 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.43□□□□□ -2.18
CDX2Q99626 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.43□□□□□ -2.18
CDX2Q99626 AC087884.1-201ENST00000469738 328 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 RPL30P1-201ENST00000488676 339 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.43□□□□□ -2.18
CDX2Q99626 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.43□□□□□ -2.18
CDX2Q99626 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.43□□□□□ -2.18
CDX2Q99626 AC022616.8-201ENST00000533569 253 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.43□□□□□ -2.18
CDX2Q99626 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC008945.2-201ENST00000606056 604 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 AC139792.3-201ENST00000623525 224 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 MIR3688-2-201ENST00000636963 87 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDX2Q99626 ZNF680P1-201ENST00000436625 1469 ntBASIC1.43□□□□□ -2.18
CDX2Q99626 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.42□□□□□ -2.18
CDX2Q99626 SNORD56.1-201ENST00000362913 68 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 RNU6-1285P-201ENST00000363480 105 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 RNU6-105P-201ENST00000363909 104 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 SNORA62.1-201ENST00000364287 154 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 RNU6-715P-201ENST00000365204 103 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 SNORA40.19-201ENST00000390846 128 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 RNU6-648P-201ENST00000410190 107 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 RNA5SP111-201ENST00000411386 101 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.42□□□□□ -2.18
CDX2Q99626 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 VN1R36P-201ENST00000414936 291 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms