Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIR548AO-201ENST00000579992 96 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 AL137246.1-201ENST00000607072 977 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 AC006504.8-201ENST00000621046 635 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 AC093875.1-201ENST00000623688 504 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RNU6-994P-201ENST00000410507 111 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RNU6-712P-201ENST00000410558 100 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RPL17P19-201ENST00000489069 552 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RNU7-129P-201ENST00000516128 62 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 MIR4306-201ENST00000583390 91 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 SNORA25.18-201ENST00000607153 114 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RMST_7.1-201ENST00000621935 268 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 AC068205.3-201ENST00000636385 468 ntBASIC-0.66□□□□□ -2.52
CSMD1Q96PZ7 RNU1-76P-201ENST00000362903 159 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 RNU6-47P-201ENST00000383866 107 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 AL008629.1-201ENST00000438615 184 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 MIR1-1-201ENST00000362147 71 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 RNU6-23P-201ENST00000363283 107 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 AC090572.1-201ENST00000519251 160 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 AC012507.3-201ENST00000603556 477 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 AP000676.3-201ENST00000623299 569 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 AL109659.3-201ENST00000624985 950 ntBASIC-0.67□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 MT-TC-201ENST00000387405 66 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 C1DP2-201ENST00000418167 426 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 C1DP4-201ENST00000455429 424 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 RNU6-922P-201ENST00000516753 99 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AP003168.1-201ENST00000530091 307 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AP002360.4-201ENST00000606980 481 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AL603839.4-201ENST00000624658 1005 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 MIR573-201ENST00000384964 99 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 MIR29B2-201ENST00000385055 81 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 MIR124-2-201ENST00000385081 109 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 SNORA26.3-201ENST00000391119 136 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 RNA5SP481-201ENST00000516814 122 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AP005212.4-201ENST00000614206 710 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AP002371.1-201ENST00000463604 433 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 MTND4LP26-201ENST00000518144 282 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 MIR4300-201ENST00000581016 96 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AC104695.3-201ENST00000604052 296 ntBASIC-0.68□□□□□ -2.52
CSMD1Q96PZ7 AL590383.1-201ENST00000428602 75 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 RPS29P27-201ENST00000463711 170 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 AC083799.1-201ENST00000366451 910 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 SNORA12-201ENST00000391162 147 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 TRBV8-1-201ENST00000481590 279 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 RPL36AP48-201ENST00000485521 314 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 RNU6-947P-201ENST00000516264 106 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 AC100830.2-201ENST00000581636 240 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 AC098483.2-201ENST00000603158 454 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 AC008993.2-201ENST00000631744 806 ntBASIC-0.69□□□□□ -2.52
CSMD1Q96PZ7 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 MIR888-201ENST00000401186 77 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 RNU4-30P-201ENST00000410245 143 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 ELOCP9-201ENST00000418624 239 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AC133104.1-201ENST00000429100 218 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 LINC01399-202ENST00000458450 244 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AC024589.1-201ENST00000512207 263 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 RNU6-897P-201ENST00000517135 105 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AL161729.4-201ENST00000604650 476 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 SMIM11P1-201ENST00000369586 178 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 SNORA26-201ENST00000391286 122 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AC112771.1-201ENST00000463581 102 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AL034555.1-201ENST00000604816 211 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AL356596.1-201ENST00000624230 379 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 ZNF849P-201ENST00000594711 1566 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 RNU6-296P-201ENST00000384608 107 ntBASIC-0.7□□□□□ -2.52
CSMD1Q96PZ7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms