Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC007395.1-201ENST00000451333 677 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 PCMTD1P1-201ENST00000455560 355 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AF186996.7-201ENST00000492781 209 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2□□□□□ -2.09
VPS33AQ96AX1 AC022254.1-201ENST00000567857 235 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2□□□□□ -2.09
VPS33AQ96AX1 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 MIR3976-201ENST00000606807 139 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AC090517.2-201ENST00000614966 680 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AC005562.2-201ENST00000618264 111 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 MIR3688-2-201ENST00000636963 87 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2□□□□□ -2.09
VPS33AQ96AX1 MIR340-201ENST00000362125 95 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 Y_RNA.295-201ENST00000364918 102 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 SNORA18.2-201ENST00000383865 132 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 RNU6-790P-201ENST00000384479 105 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VPS33AQ96AX1 MIR300-201ENST00000401138 83 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AL513185.2-201ENST00000425543 193 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 MTND1P11-201ENST00000456661 876 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AC007215.1-201ENST00000464893 276 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 RPS29P25-201ENST00000481709 171 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS33AQ96AX1 MIR3162-201ENST00000581818 82 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 MIR3672-201ENST00000584290 82 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AC009033.1-201ENST00000624279 431 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 AC090617.10-201ENST00000624308 134 ntBASIC1.99□□□□□ -2.09
VPS33AQ96AX1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS33AQ96AX1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS33AQ96AX1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 XGY1-201ENST00000381172 446 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 Y_RNA.453-201ENST00000384223 109 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 SNORA12.2-201ENST00000391040 156 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 AC139712.2-201ENST00000424302 339 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 C8orf59P1-201ENST00000429930 303 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 MTCYBP18-201ENST00000501056 747 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 DEFB131C-201ENST00000528817 165 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 DUXAP9-208ENST00000622815 614 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 SCARNA4-201ENST00000629045 128 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 AC068137.4-201ENST00000638485 296 ntBASIC1.98□□□□□ -2.09
VPS33AQ96AX1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS33AQ96AX1 Y_RNA.151-201ENST00000363566 112 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 SNORD116-11-201ENST00000383882 92 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AL590632.1-201ENST00000424289 371 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 MTCO1P44-201ENST00000441935 243 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AL357134.1-201ENST00000445848 426 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AC079354.2-201ENST00000453523 154 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AC130509.1-201ENST00000464158 433 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AC087477.1-201ENST00000465747 340 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 MTCO2P30-201ENST00000503662 364 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 POLR3GP2-201ENST00000588366 668 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 AC016727.2-201ENST00000603988 621 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS33AQ96AX1 MTND5P9-201ENST00000503854 1755 ntBASIC1.97□□□□□ -2.09
VPS33AQ96AX1 SNORD50.1-201ENST00000362987 71 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 MIR517A-201ENST00000385001 87 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 MIR320B2-201ENST00000408479 138 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS33AQ96AX1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AP001486.1-201ENST00000463339 476 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AL049873.1-201ENST00000480540 376 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 RPL23AP75-201ENST00000491601 451 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 RNU6-864P-201ENST00000516256 108 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AP002770.2-201ENST00000543613 532 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 SNRPGP20-201ENST00000604477 205 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS33AQ96AX1 MIR3662-201ENST00000637030 95 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms