Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.74□□□□□ -2.13
LHX4Q969G2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LHX4Q969G2 AC002984.1-201ENST00000591692 448 ntBASIC1.74□□□□□ -2.13
LHX4Q969G2 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
LHX4Q969G2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LHX4Q969G2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LHX4Q969G2 RNU1-58P-201ENST00000362413 163 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 Y_RNA.453-201ENST00000384223 109 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 SNORA8-201ENST00000384574 139 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 RNU6-95P-201ENST00000384697 107 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 MIR521-1-201ENST00000384902 87 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 RNA5SP118-201ENST00000410385 109 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 AL590632.1-201ENST00000424289 371 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 MTND1P11-201ENST00000456661 876 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX4Q969G2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX4Q969G2 MRPS36P4-201ENST00000534436 298 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX4Q969G2 FGF7P1-201ENST00000582820 288 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 MIR3672-201ENST00000584290 82 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 AC025754.2-201ENST00000606491 432 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 AC098657.3-201ENST00000620434 263 ntBASIC1.73□□□□□ -2.13
LHX4Q969G2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX4Q969G2 RNU6-968P-201ENST00000384076 107 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 RNU6-784P-201ENST00000384330 106 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 MIR597-201ENST00000384968 97 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LHX4Q969G2 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 RNU2-40P-201ENST00000410833 196 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX4Q969G2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.72□□□□□ -2.13
LHX4Q969G2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX4Q969G2 HMGN2P3-201ENST00000433603 273 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 HMGN2P5-201ENST00000436882 273 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 FTH1P25-201ENST00000447665 469 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LHX4Q969G2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX4Q969G2 snoU13.15-201ENST00000459407 104 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 AC011352.1-201ENST00000512300 793 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX4Q969G2 RNU6-718P-201ENST00000516166 105 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 RNU6-1314P-201ENST00000517139 104 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 AP005639.2-201ENST00000527592 928 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 AC090517.1-201ENST00000569307 266 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 AC023043.2-201ENST00000589678 1026 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX4Q969G2 MIR3976-201ENST00000606807 139 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.72□□□□□ -2.13
LHX4Q969G2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX4Q969G2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.72□□□□□ -2.13
LHX4Q969G2 MIR3662-201ENST00000637030 95 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 AC073869.6-201ENST00000640656 341 ntBASIC1.72□□□□□ -2.13
LHX4Q969G2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LHX4Q969G2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LHX4Q969G2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LHX4Q969G2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.72□□□□□ -2.13
LHX4Q969G2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU6-562P-201ENST00000362731 107 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU1-76P-201ENST00000362903 159 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 Y_RNA.151-201ENST00000363566 112 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 Y_RNA.157-201ENST00000363638 102 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 Y_RNA.212-201ENST00000364177 102 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RNA5SP160-201ENST00000364866 120 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU6-160P-201ENST00000384591 107 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU11-3P-201ENST00000391111 133 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU6-1093P-201ENST00000391194 107 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 AL033519.2-201ENST00000403958 392 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU6-1148P-201ENST00000410992 104 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RPS26P42-201ENST00000413485 326 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.71□□□□□ -2.14
LHX4Q969G2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.71□□□□□ -2.14
LHX4Q969G2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.71□□□□□ -2.14
LHX4Q969G2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.71□□□□□ -2.14
LHX4Q969G2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.71□□□□□ -2.14
LHX4Q969G2 AC092989.1-201ENST00000481235 277 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 AF186996.7-201ENST00000492781 209 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.71□□□□□ -2.14
LHX4Q969G2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 AC087441.2-201ENST00000529141 262 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.71□□□□□ -2.14
LHX4Q969G2 MIR4448-201ENST00000584360 86 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 MIR3942-201ENST00000585264 109 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 RPL17P51-201ENST00000605218 238 ntBASIC1.71□□□□□ -2.14
LHX4Q969G2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
LHX4Q969G2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.71□□□□□ -2.14
LHX4Q969G2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.71□□□□□ -2.14
LHX4Q969G2 SNORD114-1-201ENST00000362705 72 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 SNORA32.2-201ENST00000384049 122 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LHX4Q969G2 RNA5SP494-201ENST00000410653 129 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC009161.1-201ENST00000417306 376 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC123900.1-201ENST00000420390 96 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 EIF4EP2-201ENST00000422816 654 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.7□□□□□ -2.14
LHX4Q969G2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.7□□□□□ -2.14
LHX4Q969G2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LHX4Q969G2 TOMM22P6-201ENST00000465035 409 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms