Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-1159P-201ENST00000362933 107 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 RNU6-694P-201ENST00000364071 147 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 RNU6-99P-201ENST00000364721 107 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.395-201ENST00000383945 109 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 RNU6-17P-201ENST00000384245 107 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 RNU6-18P-201ENST00000384527 107 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 MIR32-201ENST00000384965 70 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 AL161788.1-201ENST00000441805 169 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 AC104389.3-201ENST00000445629 235 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.701-201ENST00000516812 110 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 HSPE1P20-201ENST00000538133 289 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 AC004584.2-201ENST00000570407 410 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 MIR4635-201ENST00000583759 79 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 AC100812.1-201ENST00000607622 580 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 AC008121.3-201ENST00000618726 433 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 MIR6733-201ENST00000635723 61 ntBASIC2.65□□□□□ -1.99
HMGB4Q8WW32 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HMGB4Q8WW32 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGB4Q8WW32 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGB4Q8WW32 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGB4Q8WW32 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 RNA5SP125-201ENST00000364843 120 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.577-201ENST00000384794 101 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 MIR153-2-201ENST00000385225 87 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 RNU2-25P-201ENST00000411041 191 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AL590556.1-201ENST00000423231 483 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 CYP2C59P-201ENST00000457790 269 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 RNU6-976P-201ENST00000516086 111 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 RNU6-699P-201ENST00000517081 110 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AC023824.2-201ENST00000566185 400 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AC044792.1-201ENST00000593294 196 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 AL355802.3-201ENST00000607571 545 ntBASIC2.64□□□□□ -1.99
HMGB4Q8WW32 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HMGB4Q8WW32 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.5-201ENST00000362334 102 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 RNU6-874P-201ENST00000362390 105 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 U8.2-201ENST00000363156 134 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 U3.9-201ENST00000363823 204 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 RNU6-944P-201ENST00000364023 107 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 SNORD32B-201ENST00000364460 84 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 RNA5SP240-201ENST00000365355 128 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 MIR487A-201ENST00000385009 80 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 SNORA12-201ENST00000391162 147 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 RNU6-1093P-201ENST00000391194 107 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 MIR190B-201ENST00000401119 79 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.597-201ENST00000410463 100 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 RNU2-63P-201ENST00000410792 194 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 AL451074.5-201ENST00000415894 435 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 AC009963.1-201ENST00000417265 157 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 MRPS18CP6-201ENST00000423587 223 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 TOMM22P6-201ENST00000465035 409 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.706-201ENST00000516933 99 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 EIF4A1P12-201ENST00000551910 141 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
HMGB4Q8WW32 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HMGB4Q8WW32 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.138-201ENST00000363462 102 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 SNORD115-8-201ENST00000363856 82 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 SNORD115-38-201ENST00000365037 82 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RNU6-1156P-201ENST00000410365 100 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RNA5SP344-201ENST00000411081 104 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AL354751.2-201ENST00000415471 210 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AC007098.1-201ENST00000420122 367 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 MTND1P14-201ENST00000427400 950 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RPS29P6-201ENST00000438196 145 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AL137792.2-201ENST00000443484 235 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AC010095.1-201ENST00000443543 144 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AC007215.1-201ENST00000464893 276 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 CKS1BP2-201ENST00000497342 240 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RNU1-41P-201ENST00000516161 162 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RNA5SP76-201ENST00000516277 87 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 RNU1-48P-201ENST00000516400 162 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 SNORA48.11-201ENST00000517015 89 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AC027288.2-201ENST00000553028 243 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 uc_338.22-201ENST00000622722 187 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AC091925.1-201ENST00000623204 462 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms