Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 ACA59.2-201ENST00000517061 156 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 RNU6-988P-201ENST00000519081 107 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM58Q8NG06 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM58Q8NG06 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM58Q8NG06 MIR5571-201ENST00000577998 113 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 MIR3162-201ENST00000581818 82 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.36□□□□□ -2.03
TRIM58Q8NG06 SNRPGP17-201ENST00000603780 214 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 AC091152.3-201ENST00000604227 325 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 uc_338.22-201ENST00000622722 187 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 MIR3529-201ENST00000637713 78 ntBASIC2.36□□□□□ -2.03
TRIM58Q8NG06 AL136360.1-201ENST00000503377 1900 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC062016.1-201ENST00000355719 319 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 RNA5SP68-201ENST00000363885 119 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 RNU6-748P-201ENST00000384648 107 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 SNORA48.3-201ENST00000391081 134 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 U6atac.2-201ENST00000408644 118 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 MED28P2-201ENST00000475771 317 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 SCARNA15.1-201ENST00000516384 125 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC105245.1-201ENST00000581934 244 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC078795.3-201ENST00000602913 472 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AL033523.1-201ENST00000605153 153 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 SNORD14A-201ENST00000606526 91 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC241585.2-209ENST00000638217 143 ntBASIC2.35□□□□□ -2.03
TRIM58Q8NG06 AC009541.1-201ENST00000438279 2662 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.31-201ENST00000362574 102 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.123-201ENST00000363338 102 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.132-201ENST00000363421 102 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.162-201ENST00000363683 102 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.422-201ENST00000384054 114 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.428-201ENST00000384078 102 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 Y_RNA.463-201ENST00000384271 102 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 MIR544A-201ENST00000384855 91 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TRIM58Q8NG06 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.34□□□□□ -2.03
TRIM58Q8NG06 EIF4EP2-201ENST00000422816 654 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AC243964.1-201ENST00000441814 261 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 UBE2DNL-203ENST00000474922 222 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 RPL17P19-201ENST00000489069 552 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 RNU6-120P-201ENST00000516077 103 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 RNA5SP148-201ENST00000516527 94 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 RNU6-699P-201ENST00000517081 110 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AC023442.1-201ENST00000531247 422 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM58Q8NG06 CBX3P8-201ENST00000532412 525 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 CYCSP26-201ENST00000534107 320 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM58Q8NG06 MIR4448-201ENST00000584360 86 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM58Q8NG06 7SK.7-201ENST00000603504 247 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 AP001836.1-201ENST00000604675 523 ntBASIC2.34□□□□□ -2.03
TRIM58Q8NG06 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM58Q8NG06 MTND5P9-201ENST00000503854 1755 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM58Q8NG06 RNY1P16-201ENST00000363063 111 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 Y_RNA.112-201ENST00000363250 102 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 Y_RNA.216-201ENST00000364205 93 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 RNU6-843P-201ENST00000384454 104 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 RNU6-692P-201ENST00000384496 107 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 Y_RNA.533-201ENST00000384596 114 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 RNU6-308P-201ENST00000390957 107 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AP000275.1-201ENST00000411943 390 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AL137792.2-201ENST00000443484 235 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AL035666.1-201ENST00000446195 348 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AC025033.1-201ENST00000463883 194 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 SNRPGP7-201ENST00000469016 106 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AC022447.4-201ENST00000504053 364 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 SNORD116.3-201ENST00000517176 78 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM58Q8NG06 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AL359851.1-201ENST00000569460 4997 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 AL109809.4-201ENST00000603520 2185 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
TRIM58Q8NG06 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TRIM58Q8NG06 Y_RNA.5-201ENST00000362334 102 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 Y_RNA.28-201ENST00000362554 111 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 SNORA22B-201ENST00000383876 138 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 RNA5SP390-201ENST00000410191 113 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM58Q8NG06 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 AL353997.1-201ENST00000432936 108 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
TRIM58Q8NG06 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms