Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC027575.1-201ENST00000481064 460 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-470P-201ENST00000515954 104 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-1170P-201ENST00000515974 106 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.701-201ENST00000516812 110 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 SUB1P3-201ENST00000564581 315 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 SCARNA4-201ENST00000629045 128 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 MIR6073-201ENST00000352083 89 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 RNU6-655P-201ENST00000362858 107 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 RNU1-72P-201ENST00000362976 153 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.197-201ENST00000364004 102 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 SNORA29-201ENST00000384183 140 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 CBX3P9-201ENST00000402326 552 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 U6atac.2-201ENST00000408644 118 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 RPL30P10-201ENST00000488148 337 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 RN7SL636P-201ENST00000497504 294 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 HMGB1P35-201ENST00000503360 598 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 SCARNA3-201ENST00000517097 143 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 AL078605.1-201ENST00000603529 500 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS52Q8N1B4 AC233981.2-201ENST00000611524 1614 ntBASIC2.68□□□□□ -1.98
VPS52Q8N1B4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 SNORA36A-201ENST00000384221 132 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RN7SKP192-201ENST00000411291 327 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AL354751.2-201ENST00000415471 210 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RPL30P4-201ENST00000429309 333 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC080013.2-201ENST00000460866 323 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 SNRPGP7-201ENST00000469016 106 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 UBL5P3-201ENST00000475112 231 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RPL17P19-201ENST00000489069 552 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RPL23AP75-201ENST00000491601 451 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AF186996.7-201ENST00000492781 209 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RPS29P21-201ENST00000496272 170 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 SNORA25.11-201ENST00000515935 105 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RNU2-53P-201ENST00000516257 147 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 SNORA31.16-201ENST00000516773 139 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC007375.1-201ENST00000554513 578 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 MIR5092-201ENST00000583139 88 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 MIR3117-201ENST00000584034 78 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC090971.5-201ENST00000621102 293 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 SNORD98-201ENST00000636377 67 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 AC080128.1-201ENST00000474389 1917 ntBASIC2.67□□□□□ -1.98
VPS52Q8N1B4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS52Q8N1B4 RNU6-490P-201ENST00000362985 107 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 RNY1P16-201ENST00000363063 111 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 SNORD115-32-201ENST00000364079 82 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.463-201ENST00000384271 102 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AL590135.1-201ENST00000422215 156 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC019205.3-201ENST00000424573 156 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 MTCYBP6-201ENST00000441810 138 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC007677.1-201ENST00000445757 515 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC016700.2-201ENST00000446011 156 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 RN7SKP210-201ENST00000459176 261 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC068781.1-201ENST00000488231 618 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC015911.1-201ENST00000495111 156 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC022493.2-201ENST00000506122 481 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AL034555.1-201ENST00000604816 211 ntBASIC2.66□□□□□ -1.98
VPS52Q8N1B4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS52Q8N1B4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
VPS52Q8N1B4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
VPS52Q8N1B4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS52Q8N1B4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms