Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RAC1P2-201ENST00000511164 579 ntBASIC4.25□□□□□ -1.73
TRIM50Q86XT4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM50Q86XT4 AC021269.2-201ENST00000532318 330 ntBASIC4.25□□□□□ -1.73
TRIM50Q86XT4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM50Q86XT4 uc_338.32-201ENST00000615087 172 ntBASIC4.25□□□□□ -1.73
TRIM50Q86XT4 AC006111.3-201ENST00000622137 383 ntBASIC4.25□□□□□ -1.73
TRIM50Q86XT4 AC002546.1-201ENST00000588041 2504 ntBASIC4.25□□□□□ -1.73
TRIM50Q86XT4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
TRIM50Q86XT4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC010680.1-201ENST00000590024 3590 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 RNA5SP119-201ENST00000362715 117 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 Y_RNA.243-201ENST00000364481 109 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 RNA5SP51-201ENST00000364750 119 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 RNU6-275P-201ENST00000364910 107 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 Y_RNA.568-201ENST00000384742 113 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 RNU6-710P-201ENST00000410424 105 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 HMGN2P31-201ENST00000432430 273 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC005840.1-201ENST00000498412 377 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 MIR3922-201ENST00000585192 84 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC069294.1-201ENST00000608397 350 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC068700.1-201ENST00000565862 3754 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC026241.1-201ENST00000517873 2142 ntBASIC4.24□□□□□ -1.73
TRIM50Q86XT4 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 SNORD46.1-201ENST00000364139 104 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 RNU6-818P-201ENST00000364837 108 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 SNORA72.4-201ENST00000384174 132 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 AL365496.1-201ENST00000426885 215 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 SNORA31.21-201ENST00000517180 77 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 MIR5187-201ENST00000583479 76 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 AC110741.2-201ENST00000605278 268 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 AC012314.7-201ENST00000619693 93 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM50Q86XT4 FAM35DP-201ENST00000323387 2712 ntBASIC4.23□□□□□ -1.73
TRIM50Q86XT4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 RNU6-417P-201ENST00000384712 107 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 CR769767.1-201ENST00000436337 346 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 Z75741.1-201ENST00000446793 314 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 AL031183.1-201ENST00000457667 207 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 RPS26P15-201ENST00000488067 348 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 RN7SKP164-201ENST00000516138 266 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 SNORA62.6-201ENST00000606322 83 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 Y_RNA.778-201ENST00000620203 90 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 U6.115-201ENST00000636045 103 ntBASIC4.22□□□□□ -1.73
TRIM50Q86XT4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM50Q86XT4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.21□□□□□ -1.73
TRIM50Q86XT4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.21□□□□□ -1.73
TRIM50Q86XT4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM50Q86XT4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM50Q86XT4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM50Q86XT4 U3.8-201ENST00000363675 217 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 snoU2_19.4-201ENST00000364329 80 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 RNU6-1305P-201ENST00000364353 104 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 SNORA67.2-201ENST00000384300 149 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 RNU6-959P-201ENST00000384671 107 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 SNORA8.3-201ENST00000384679 139 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 MIR548B-201ENST00000385247 97 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TRIM50Q86XT4 RNU2-51P-201ENST00000410708 197 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 RPL23AP62-201ENST00000463396 453 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 AL049830.2-201ENST00000480072 201 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 RNA5SP272-201ENST00000516095 111 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 RNU6-426P-201ENST00000516464 97 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM50Q86XT4 AC079598.5-201ENST00000547460 117 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 MIR4744-201ENST00000581563 82 ntBASIC4.21□□□□□ -1.74
TRIM50Q86XT4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms