Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU7-66P-201ENST00000459469 62 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RPL9P9-202ENST00000466501 579 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 FGF7P4-201ENST00000509595 295 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RNA5SP281-201ENST00000516504 135 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 AC022202.1-201ENST00000613515 211 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 MTND4P23-201ENST00000447723 1363 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.132-201ENST00000363421 102 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 SNORD32B-201ENST00000364460 84 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.356-201ENST00000365475 113 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-1329P-201ENST00000365664 107 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-128P-201ENST00000383976 107 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-767P-201ENST00000384132 107 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.474-201ENST00000384341 102 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-160P-201ENST00000384591 107 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RNU2-48P-201ENST00000410694 191 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC007677.1-201ENST00000445757 515 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC103851.1-201ENST00000506833 274 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC109446.1-201ENST00000566172 220 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC100830.2-201ENST00000581636 240 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC044792.1-201ENST00000593294 196 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2□□□□□ -2.09
NHLRC1Q6VVB1 CTHRC1P1-201ENST00000605383 469 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-89P-201ENST00000606519 100 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC009248.2-201ENST00000619826 254 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC130454.1-201ENST00000622948 401 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC064859.1-201ENST00000624741 174 ntBASIC2□□□□□ -2.09
NHLRC1Q6VVB1 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.11-201ENST00000362375 109 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-79P-201ENST00000362764 141 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 U8.2-201ENST00000363156 134 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.157-201ENST00000363638 102 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-438P-201ENST00000365561 103 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-831P-201ENST00000384548 107 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 SNORD73A-201ENST00000386062 65 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNA5SP118-201ENST00000410385 109 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AL513185.2-201ENST00000425543 193 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 MTCO3P46-201ENST00000425787 232 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RPL23AP6-201ENST00000446637 472 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AC093259.1-201ENST00000509755 300 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-237P-201ENST00000515985 71 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 RNA5SP490-201ENST00000517141 136 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AC105029.1-201ENST00000520250 669 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 SNRPGP18-201ENST00000553000 214 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 SNORD53-201ENST00000579969 78 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 MIR5692C1-201ENST00000585309 91 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AC016727.1-205ENST00000605437 569 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 AL050343.2-201ENST00000607338 280 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.99□□□□□ -2.09
NHLRC1Q6VVB1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-234P-201ENST00000365229 104 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 MIR221-201ENST00000385135 110 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 RNU11-3P-201ENST00000391111 133 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-373P-201ENST00000411247 98 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 AL354751.2-201ENST00000415471 210 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 AC012306.1-201ENST00000423267 114 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 MTND4P17-201ENST00000470444 350 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms