Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 Y_RNA.400-201ENST00000383963 111 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 HMGN2P8-201ENST00000391458 268 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AL357139.1-201ENST00000407792 426 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AC025750.2-201ENST00000442609 450 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AC124916.1-201ENST00000444020 547 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 SNORA70.19-201ENST00000516717 90 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-928P-201ENST00000516876 104 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AP005660.1-201ENST00000522972 293 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 MIR5692C2-201ENST00000577959 77 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AL138880.2-201ENST00000616214 239 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 AC018692.3-201ENST00000623929 123 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 snoU18.1-201ENST00000629629 71 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 U6.99-201ENST00000637524 83 ntBASIC3.57□□□□□ -1.84
CNKSR3Q6P9H4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 FTLP6-201ENST00000355274 422 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-449P-201ENST00000383914 107 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-211P-201ENST00000384047 107 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 Y_RNA.488-201ENST00000384403 102 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 Y_RNA.571-201ENST00000384753 98 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 MIR518D-201ENST00000385014 87 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 RNA5SP38-201ENST00000410750 119 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 SNRPEP9-201ENST00000436794 238 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-58P-201ENST00000517143 103 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AC005176.2-201ENST00000596933 147 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AL033523.1-201ENST00000605153 153 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 FTX_3.1-201ENST00000610451 147 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AC022149.2-201ENST00000621061 203 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AC073308.1-201ENST00000623696 305 ntBASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CNKSR3Q6P9H4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AC091152.2-201ENST00000591628 2569 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 Y_RNA.215-201ENST00000364204 112 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 SNORD20-201ENST00000384550 80 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-658P-201ENST00000384606 106 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RPL23AP95-201ENST00000426806 265 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RPL23AP67-201ENST00000465341 474 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RNA5SP272-201ENST00000516095 111 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-703P-201ENST00000516946 107 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 SUMO2P18-201ENST00000518873 252 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AC022441.3-201ENST00000605737 136 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AL137790.1-201ENST00000634283 177 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 AC100821.1-201ENST00000523153 2479 ntBASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNKSR3Q6P9H4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC018555.1-201ENST00000567548 1980 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 ZNF204P-201ENST00000416749 2397 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 SNORA5B-201ENST00000363786 132 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-283P-201ENST00000364788 107 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 Y_RNA.629-201ENST00000411368 105 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms