Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNA5SP482-201ENST00000391269 118 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 MIR1285-2-201ENST00000408311 88 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RPL31P53-201ENST00000457065 348 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC113420.1-201ENST00000507903 571 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RNU6-94P-201ENST00000607728 107 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 SNORA63D-201ENST00000364359 132 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 SNORD51-201ENST00000384320 80 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RNU6-505P-201ENST00000384427 107 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 SNORA26-201ENST00000391286 122 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 ELOCP14-201ENST00000428070 331 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 ELOCP7-201ENST00000439968 331 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 RNA5SP94-201ENST00000516917 108 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AP005212.4-201ENST00000614206 710 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC010809.3-201ENST00000621310 641 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 AC008993.2-201ENST00000631744 806 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 MTND5P33-201ENST00000571250 1450 ntBASIC-0.46□□□□□ -2.48
VPS13DQ5THJ4 SNORA36.1-201ENST00000363424 132 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 MTCO1P21-201ENST00000416634 589 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AC021231.3-201ENST00000558497 370 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AC107952.2-201ENST00000606048 486 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 RNA5SP493-201ENST00000364115 91 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 SNORD113.3-201ENST00000364630 78 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 SUGT1P1-201ENST00000379514 476 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AC010493.1-201ENST00000513479 292 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AC117525.1-201ENST00000515228 503 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 AP002360.4-201ENST00000606980 481 ntBASIC-0.47□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 RNU6-438P-201ENST00000365561 103 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 MTCYBP10-201ENST00000424905 650 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 OR9P1P-201ENST00000496431 281 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 AC027419.1-201ENST00000522976 328 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 AC246785.4-201ENST00000605374 287 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU6-119P-201ENST00000364882 107 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AL079342.2-201ENST00000403367 482 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 STAG3L5P-204ENST00000443759 179 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 CECR9-201ENST00000453421 199 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC022960.3-201ENST00000619794 441 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 SNORA75.1-201ENST00000391130 148 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 MIR204-201ENST00000385200 110 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU6-127P-201ENST00000390897 107 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU2-3P-201ENST00000410144 191 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 MTCO3P29-201ENST00000432119 779 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC016925.1-201ENST00000458303 298 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 MTND4P33-201ENST00000556706 766 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 FGF7P1-201ENST00000582820 288 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC006441.5-201ENST00000612680 209 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU6-858P-201ENST00000362436 107 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 MTCO2P1-201ENST00000424648 477 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU6-180P-201ENST00000516697 61 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 RNU6-586P-201ENST00000517265 104 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC018630.3-201ENST00000542637 96 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.48□□□□□ -2.49
VPS13DQ5THJ4 U8.5-201ENST00000364528 136 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 RNU6-47P-201ENST00000383866 107 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AL603865.2-201ENST00000401679 213 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AP002371.1-201ENST00000463604 433 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 RNU7-129P-201ENST00000516128 62 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 SUMO2P18-201ENST00000518873 252 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC138207.3-201ENST00000585289 166 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC004805.2-201ENST00000605382 482 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AL391903.3-201ENST00000612158 163 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 RNU4-16P-201ENST00000364737 141 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MIR196A1-201ENST00000388006 70 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 USP9YP22-201ENST00000438971 294 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC022483.1-201ENST00000514020 567 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MIR3115-201ENST00000577915 68 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MIR4782-201ENST00000577987 79 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms