Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF404Q494X3 TOMM22P2-201ENST00000430735 237 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF404Q494X3 OR2AQ1P-201ENST00000451972 200 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC022364.2-201ENST00000457963 554 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 SCARNA18-201ENST00000459004 134 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 GMFBP1-201ENST00000467831 427 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 HMGN2P9-201ENST00000476875 229 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 RPS23P5-201ENST00000495419 428 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC008628.2-201ENST00000502605 298 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.99□□□□□ -2.25
ZNF404Q494X3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF404Q494X3 MTND1P22-201ENST00000510572 951 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 RNU6-759P-201ENST00000516740 103 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC069113.1-201ENST00000517763 267 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC019288.1-201ENST00000557918 224 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF404Q494X3 AGGF1P4-201ENST00000568249 801 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC064872.1-201ENST00000604823 1072 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC009994.1-201ENST00000606889 253 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AC122133.1-201ENST00000613964 233 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AL078604.3-201ENST00000615580 211 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 MIR337-201ENST00000362281 93 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 Y_RNA.132-201ENST00000363421 102 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 RNU6-456P-201ENST00000384493 107 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 CYCSP46-201ENST00000423569 204 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 MTCO3P29-201ENST00000432119 779 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 USP9YP28-201ENST00000435142 589 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 RNU6-1041P-201ENST00000516254 102 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 SNORA18.6-201ENST00000516792 115 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 MTCO3P23-201ENST00000561363 289 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 AL136370.1-201ENST00000608166 691 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 AC005520.5-201ENST00000613926 164 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 AL136221.1-201ENST00000621449 509 ntBASIC0.98□□□□□ -2.25
ZNF404Q494X3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.98□□□□□ -2.25
ZNF404Q494X3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.98□□□□□ -2.25
ZNF404Q494X3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
ZNF404Q494X3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ZNF404Q494X3 RNU6-282P-201ENST00000365357 103 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 RNU6-53P-201ENST00000365367 106 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 RNU6-877P-201ENST00000383868 107 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.97□□□□□ -2.25
ZNF404Q494X3 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.97□□□□□ -2.25
ZNF404Q494X3 RNU6-856P-201ENST00000516959 98 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 AC015688.6-201ENST00000577737 104 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 AC064807.4-201ENST00000607201 407 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 SNORA43.4-201ENST00000629559 138 ntBASIC0.97□□□□□ -2.25
ZNF404Q494X3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.97□□□□□ -2.25
ZNF404Q494X3 MTND5P35-201ENST00000557537 1720 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 RNU6-297P-201ENST00000384636 107 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 RNU6-606P-201ENST00000384721 111 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 RNU6-331P-201ENST00000384724 107 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AL161935.2-201ENST00000414627 60 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 AC012306.1-201ENST00000423267 114 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AC133104.1-201ENST00000429100 218 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 AC069257.2-201ENST00000441819 155 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 snoU13.27-201ENST00000459278 104 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 AP002963.1-201ENST00000530590 184 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 MIR3941-201ENST00000582572 103 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 MIR4781-201ENST00000585250 76 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AP003465.2-201ENST00000602571 373 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 CTHRC1P1-201ENST00000605383 469 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.96□□□□□ -2.26
ZNF404Q494X3 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
ZNF404Q494X3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ZNF404Q494X3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ZNF404Q494X3 SNORA72.3-201ENST00000365074 132 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 Y_RNA.399-201ENST00000383955 105 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AL117342.1-201ENST00000404861 406 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 BX295541.1-201ENST00000417774 250 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 EIF1P1-201ENST00000421436 341 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 RNU7-167P-201ENST00000459160 62 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 SNORD42A-201ENST00000459584 64 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC093852.1-201ENST00000503587 266 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC091435.1-201ENST00000505442 584 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ZNF404Q494X3 AP001372.4-201ENST00000524889 472 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 RNU6-85P-201ENST00000605989 107 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC024933.1-201ENST00000608472 348 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms