Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN1BQ07699 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN1BQ07699 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN1BQ07699 TRBVA-201ENST00000498804 316 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 AC091435.1-201ENST00000505442 584 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
SCN1BQ07699 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN1BQ07699 GNAI2P1-201ENST00000541815 315 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN1BQ07699 TPRKBP2-201ENST00000565969 475 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN1BQ07699 RNA5SP289-201ENST00000362332 137 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 Y_RNA.9-201ENST00000362354 101 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 RNU6-562P-201ENST00000362731 107 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 RNU4-12P-201ENST00000365233 139 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 AL645568.3-201ENST00000433683 316 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN1BQ07699 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN1BQ07699 AC087477.1-201ENST00000465747 340 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 FAM206BP-201ENST00000510179 541 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 RNU6-256P-201ENST00000516747 97 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 SUMO2P18-201ENST00000518873 252 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN1BQ07699 SNORA59B-202ENST00000578183 701 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 MIR5006-201ENST00000583027 110 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SCN1BQ07699 RMST_6.1-201ENST00000611980 203 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 AC083806.3-201ENST00000614016 455 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 AL138726.1-201ENST00000614873 333 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
SCN1BQ07699 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SCN1BQ07699 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SCN1BQ07699 AL159152.1-201ENST00000635019 2587 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 RNU6-877P-201ENST00000383868 107 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 Y_RNA.414-201ENST00000384011 101 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 Y_RNA.516-201ENST00000384541 124 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 SNORD116-4-201ENST00000384733 96 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 NCOR1P3-201ENST00000420479 303 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN1BQ07699 AC004386.2-201ENST00000441858 148 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 MTCO1P44-201ENST00000441935 243 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 AC007395.1-201ENST00000451333 677 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCN1BQ07699 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN1BQ07699 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.86□□□□□ -2.11
SCN1BQ07699 AC026470.2-201ENST00000561492 181 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 AC023043.2-201ENST00000589678 1026 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 AP000907.4-201ENST00000604143 237 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN1BQ07699 MIR6132-201ENST00000622083 109 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 AC090617.10-201ENST00000624308 134 ntBASIC1.86□□□□□ -2.11
SCN1BQ07699 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCN1BQ07699 Y_RNA.100-201ENST00000363141 102 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 Y_RNA.132-201ENST00000363421 102 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 RNY4P14-201ENST00000363656 96 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 Y_RNA.450-201ENST00000384198 113 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SCN1BQ07699 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 ZNF885P-201ENST00000420174 1098 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 MTCO3P46-201ENST00000425787 232 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 AC018634.1-201ENST00000437554 401 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 HSPE1P21-201ENST00000438283 308 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 HMGB1P18-201ENST00000438801 619 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN1BQ07699 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN1BQ07699 AL353572.1-201ENST00000442490 417 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 AL513124.1-201ENST00000450410 614 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 OR2AQ1P-201ENST00000451972 200 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 PCMTD1P1-201ENST00000455560 355 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 MTND1P11-201ENST00000456661 876 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 AC010409.1-201ENST00000487382 476 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 YWHAEP4-201ENST00000505390 198 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN1BQ07699 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN1BQ07699 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN1BQ07699 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN1BQ07699 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN1BQ07699 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
SCN1BQ07699 MTND5P9-201ENST00000503854 1755 ntBASIC1.85□□□□□ -2.11
SCN1BQ07699 Y_RNA.89-201ENST00000363031 102 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 RNU6-418P-201ENST00000384035 107 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 MIR517A-201ENST00000385001 87 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 MIR487A-201ENST00000385009 80 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 MIR634-201ENST00000385208 97 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 MIR1283-1-201ENST00000408494 87 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 RNU6-373P-201ENST00000411247 98 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 AC004866.1-201ENST00000411748 78 ntBASIC1.84□□□□□ -2.11
SCN1BQ07699 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SCN1BQ07699 MTCO3P8-201ENST00000453691 755 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms