Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
COL4A3Q01955 MAPK10-373ENST00000641983 6772 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A3Q01955 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A3Q01955 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 RNU6-1280P-201ENST00000365211 107 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 RNU6-47P-201ENST00000383866 107 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 MIR7-2-201ENST00000384970 110 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 MIR10B-201ENST00000385011 110 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 MIR493-201ENST00000385254 89 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 MIR708-201ENST00000390708 88 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 RPL23AP36-201ENST00000413895 458 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 AL358075.3-201ENST00000426289 226 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A3Q01955 HMGB3P8-201ENST00000449709 577 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 SNRPGP7-201ENST00000469016 106 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 MRPL42P6-201ENST00000486397 371 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A3Q01955 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 Y_RNA.662-201ENST00000516028 97 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 RNA5SP458-201ENST00000516188 119 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 SNORA27.4-201ENST00000516650 95 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 UBL5P4-201ENST00000562584 236 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A3Q01955 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 AC019159.1-201ENST00000605094 187 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 AL138963.2-201ENST00000605137 226 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
COL4A3Q01955 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A3Q01955 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A3Q01955 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL4A3Q01955 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A3Q01955 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.03□□□□□ -1.92
COL4A3Q01955 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A3Q01955 RNA5SP361-201ENST00000362686 118 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 Y_RNA.508-201ENST00000384502 114 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 MIR329-1-201ENST00000385028 80 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 HMGN2P30-201ENST00000423237 256 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 RPL23AP95-201ENST00000426806 265 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 RN7SL442P-201ENST00000473804 320 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 AC078817.1-201ENST00000492623 435 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 RPL30P5-201ENST00000494923 336 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 AC074198.2-201ENST00000508153 258 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 AC022559.1-201ENST00000520905 205 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 AC027288.2-201ENST00000553028 243 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 MIR5695-201ENST00000579717 85 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 MIR4282-201ENST00000583613 67 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 AC006001.4-201ENST00000622243 395 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A3Q01955 AC093908.1-201ENST00000623125 8092 ntBASIC3.03□□□□□ -1.92
COL4A3Q01955 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A3Q01955 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
COL4A3Q01955 RNU6-1020P-201ENST00000363684 107 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 RNU6-884P-201ENST00000363889 107 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 RNU6-961P-201ENST00000363893 105 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 Y_RNA.319-201ENST00000365138 92 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 FTH1P15-201ENST00000406984 280 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 RN7SKP51-201ENST00000410781 304 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 RNU2-61P-201ENST00000411069 191 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 AC007969.2-201ENST00000441891 191 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 GPM6BP3-201ENST00000442797 145 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A3Q01955 AC012308.1-201ENST00000451232 178 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 SNORD109B-201ENST00000458961 67 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 SNORD109A-201ENST00000459128 67 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 RPL26P26-201ENST00000480251 434 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 SNORD116-28-201ENST00000516123 91 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.02□□□□□ -1.93
COL4A3Q01955 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A3Q01955 HSPE1P4-201ENST00000550617 308 ntBASIC3.02□□□□□ -1.93
COL4A3Q01955 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.02□□□□□ -1.93
COL4A3Q01955 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A3Q01955 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A3Q01955 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
COL4A3Q01955 Y_RNA.230-201ENST00000364348 109 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 Y_RNA.275-201ENST00000364726 110 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 RNU6-1175P-201ENST00000365200 107 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 RNU6-159P-201ENST00000391080 106 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 MIR888-201ENST00000401186 77 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 Y_RNA.595-201ENST00000410403 105 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A3Q01955 RPL26P27-201ENST00000414397 437 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AC078809.1-201ENST00000427601 140 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AC087499.2-201ENST00000432861 149 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AL512844.2-201ENST00000433990 593 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 NDUFB4P6-201ENST00000436819 366 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A3Q01955 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A3Q01955 AC016632.1-201ENST00000503994 196 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 RNA5SP54-201ENST00000516951 92 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 NACAP3-201ENST00000552100 481 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AL391261.3-201ENST00000557194 520 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AC005828.6-201ENST00000606610 232 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 MIR6134-201ENST00000617606 109 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 AC021753.1-201ENST00000635724 168 ntBASIC3.01□□□□□ -1.93
COL4A3Q01955 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms