Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.288-201ENST00000364854 92 ntBASIC2.14□□□□□ -2.07
LMO4P61968 Z98749.2-208ENST00000381646 500 ntBASIC2.14□□□□□ -2.07
LMO4P61968 Y_RNA.447-201ENST00000384184 113 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RNU6-708P-201ENST00000384217 107 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RNU6-1026P-201ENST00000384465 108 ntBASIC2.14□□□□□ -2.07
LMO4P61968 Y_RNA.526-201ENST00000384572 110 ntBASIC2.14□□□□□ -2.07
LMO4P61968 MIR628-201ENST00000385229 95 ntBASIC2.14□□□□□ -2.07
LMO4P61968 MIR147B-201ENST00000390185 80 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RPL21P75-201ENST00000396599 483 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RPL21P28-201ENST00000401418 483 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RPS29P13-201ENST00000402041 169 ntBASIC2.14□□□□□ -2.07
LMO4P61968 Y_RNA.592-201ENST00000410274 109 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC092427.1-202ENST00000430569 476 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.14□□□□□ -2.07
LMO4P61968 FCF1P4-201ENST00000448326 183 ntBASIC2.14□□□□□ -2.07
LMO4P61968 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.14□□□□□ -2.07
LMO4P61968 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.14□□□□□ -2.07
LMO4P61968 RPL21P39-201ENST00000463605 483 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC087190.1-201ENST00000484462 480 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC093591.1-201ENST00000491435 481 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RPL21P16-201ENST00000495531 483 ntBASIC2.14□□□□□ -2.07
LMO4P61968 GZMAP1-201ENST00000503054 631 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC107222.1-201ENST00000510899 637 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RNU6-377P-201ENST00000515965 102 ntBASIC2.14□□□□□ -2.07
LMO4P61968 Y_RNA.680-201ENST00000516441 93 ntBASIC2.14□□□□□ -2.07
LMO4P61968 SNORA31.18-201ENST00000517043 134 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RNU6-897P-201ENST00000517135 105 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RN7SKP40-201ENST00000517211 242 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.14□□□□□ -2.07
LMO4P61968 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.14□□□□□ -2.07
LMO4P61968 AC005357.1-201ENST00000588399 301 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AL391813.1-201ENST00000603098 260 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AL390123.1-201ENST00000603216 237 ntBASIC2.14□□□□□ -2.07
LMO4P61968 AL159153.1-201ENST00000619688 317 ntBASIC2.14□□□□□ -2.07
LMO4P61968 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LMO4P61968 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LMO4P61968 AP000560.1-201ENST00000624150 1937 ntBASIC2.13□□□□□ -2.07
LMO4P61968 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LMO4P61968 RNU6-227P-201ENST00000362865 103 ntBASIC2.13□□□□□ -2.07
LMO4P61968 Y_RNA.123-201ENST00000363338 102 ntBASIC2.13□□□□□ -2.07
LMO4P61968 RNU6-461P-201ENST00000364195 107 ntBASIC2.13□□□□□ -2.07
LMO4P61968 Y_RNA.376-201ENST00000365638 108 ntBASIC2.13□□□□□ -2.07
LMO4P61968 SNORA69.1-201ENST00000390904 137 ntBASIC2.13□□□□□ -2.07
LMO4P61968 RNU2-25P-201ENST00000411041 191 ntBASIC2.13□□□□□ -2.07
LMO4P61968 RNU6-130P-201ENST00000411112 103 ntBASIC2.13□□□□□ -2.07
LMO4P61968 PTGES3P4-201ENST00000426243 356 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AC244505.4-201ENST00000434905 287 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.13□□□□□ -2.07
LMO4P61968 Z98949.2-201ENST00000440996 144 ntBASIC2.13□□□□□ -2.07
LMO4P61968 SSXP5-201ENST00000443473 287 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AL441985.1-201ENST00000457727 251 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.13□□□□□ -2.07
LMO4P61968 RNU6-1143P-201ENST00000516125 104 ntBASIC2.13□□□□□ -2.07
LMO4P61968 RNU2-53P-201ENST00000516257 147 ntBASIC2.13□□□□□ -2.07
LMO4P61968 RNA5SP320-201ENST00000516263 124 ntBASIC2.13□□□□□ -2.07
LMO4P61968 RNU6-911P-201ENST00000516523 104 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AC109329.2-201ENST00000519658 482 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AC034114.1-201ENST00000520293 285 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AL590705.4-201ENST00000532209 134 ntBASIC2.13□□□□□ -2.07
LMO4P61968 HSPE1P20-201ENST00000538133 289 ntBASIC2.13□□□□□ -2.07
LMO4P61968 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.13□□□□□ -2.07
LMO4P61968 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.13□□□□□ -2.07
LMO4P61968 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.13□□□□□ -2.07
LMO4P61968 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.13□□□□□ -2.07
LMO4P61968 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.13□□□□□ -2.07
LMO4P61968 SCARNA4-202ENST00000625402 129 ntBASIC2.13□□□□□ -2.07
LMO4P61968 CTSLP2-204ENST00000629029 392 ntBASIC2.13□□□□□ -2.07
LMO4P61968 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.13□□□□□ -2.07
LMO4P61968 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LMO4P61968 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.12□□□□□ -2.07
LMO4P61968 AC108206.1-201ENST00000570186 4159 ntBASIC2.12□□□□□ -2.07
LMO4P61968 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMO4P61968 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LMO4P61968 Y_RNA.19-201ENST00000362462 99 ntBASIC2.12□□□□□ -2.07
LMO4P61968 Y_RNA.105-201ENST00000363182 111 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNU6-105P-201ENST00000363909 104 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNU6-770P-201ENST00000363929 105 ntBASIC2.12□□□□□ -2.07
LMO4P61968 Y_RNA.257-201ENST00000364596 102 ntBASIC2.12□□□□□ -2.07
LMO4P61968 DYNLT3P1-201ENST00000378574 347 ntBASIC2.12□□□□□ -2.07
LMO4P61968 Y_RNA.489-201ENST00000384410 101 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNU6-19P-201ENST00000384718 107 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.12□□□□□ -2.07
LMO4P61968 MIR1302-6-201ENST00000408466 90 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNU2-38P-201ENST00000410856 79 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNA5SP492-201ENST00000411330 114 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.12□□□□□ -2.07
LMO4P61968 MTCO3P19-201ENST00000415864 321 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RPEP5-201ENST00000441137 268 ntBASIC2.12□□□□□ -2.07
LMO4P61968 RNU6-1132P-201ENST00000459214 107 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AC107626.1-201ENST00000471084 183 ntBASIC2.12□□□□□ -2.07
LMO4P61968 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
LMO4P61968 AC103975.1-201ENST00000482506 483 ntBASIC2.12□□□□□ -2.07
LMO4P61968 MTND1P19-201ENST00000511780 315 ntBASIC2.12□□□□□ -2.07
LMO4P61968 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.12□□□□□ -2.07
LMO4P61968 SNORA40.15-201ENST00000516884 107 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.12□□□□□ -2.07
LMO4P61968 AP002770.2-201ENST00000543613 532 ntBASIC2.12□□□□□ -2.07
LMO4P61968 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms