Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 EIF1P4-201ENST00000572664 335 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 AC023932.2-201ENST00000603176 175 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 AC010487.4-201ENST00000637027 61 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.12□□□□□ -2.43
CKS1BP61024 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
CKS1BP61024 MIR103A1-201ENST00000362165 78 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 RNA5SP432-201ENST00000362480 116 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 RNA5SP323-201ENST00000391094 133 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.13□□□□□ -2.43
CKS1BP61024 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.13□□□□□ -2.43
CKS1BP61024 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 MTND4LP26-201ENST00000518144 282 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 AC027419.1-201ENST00000522976 328 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
CKS1BP61024 AC087883.1-201ENST00000551882 391 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 MIR3923-201ENST00000579521 83 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 AC136475.10-201ENST00000620253 385 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 AC093875.1-201ENST00000623688 504 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 MIR4315-1-201ENST00000636800 73 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 MIR371B-201ENST00000638082 66 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 MIR4315-2-201ENST00000640925 73 ntBASIC-0.13□□□□□ -2.43
CKS1BP61024 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
CKS1BP61024 RNU6-527P-201ENST00000363425 104 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
CKS1BP61024 MIR32-201ENST00000384965 70 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 ELOCP17-201ENST00000414751 326 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 RPS23P5-201ENST00000495419 428 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.14□□□□□ -2.43
CKS1BP61024 AC131055.1-201ENST00000584626 316 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 AC004223.2-201ENST00000590309 544 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 SNRPGP20-201ENST00000604477 205 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 AL031775.1-201ENST00000607014 887 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 AL391903.3-201ENST00000612158 163 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 AL157786.1-207ENST00000627771 695 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 OR5AK4P-201ENST00000635912 903 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.14□□□□□ -2.43
CKS1BP61024 RNA5SP62-201ENST00000363457 110 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 RNU6-418P-201ENST00000384035 107 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
CKS1BP61024 AL590135.1-201ENST00000422215 156 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 AC019205.3-201ENST00000424573 156 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 MTCYBP10-201ENST00000424905 650 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.15□□□□□ -2.43
CKS1BP61024 HMGN2P34-201ENST00000437647 269 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 AL606517.2-201ENST00000442855 241 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 AC016700.2-201ENST00000446011 156 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 AC015911.1-201ENST00000495111 156 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 RNA5SP436-201ENST00000516020 115 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.15□□□□□ -2.43
CKS1BP61024 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 TMF1P1-201ENST00000576058 373 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
CKS1BP61024 AL359547.2-201ENST00000615810 418 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 MIR6718-201ENST00000616153 80 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 AC073349.3-201ENST00000617616 186 ntBASIC-0.15□□□□□ -2.43
CKS1BP61024 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.15□□□□□ -2.43
CKS1BP61024 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 AL356583.2-201ENST00000426536 280 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 RPL31P35-201ENST00000431058 377 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 AC244670.1-201ENST00000436879 112 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 AC104332.1-201ENST00000440471 797 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 SNRPGP12-201ENST00000449481 213 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.16□□□□□ -2.44
CKS1BP61024 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 DEFB130C-202ENST00000530001 230 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 AP002001.1-203ENST00000534002 267 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 AC109810.1-201ENST00000534066 224 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 MIR6515-201ENST00000619843 57 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 MIR8054-201ENST00000620877 86 ntBASIC-0.16□□□□□ -2.44
CKS1BP61024 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.16□□□□□ -2.44
CKS1BP61024 SNORA42.1-201ENST00000363515 137 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 RNU6-960P-201ENST00000364056 120 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 RNY1P14-201ENST00000384426 108 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 MIR300-201ENST00000401138 83 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 MIR1284-201ENST00000408337 120 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 VPS26BP1-201ENST00000417155 755 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 RPL23AP30-201ENST00000432419 501 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.17□□□□□ -2.44
CKS1BP61024 USP9YP28-201ENST00000435142 589 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 MTCO1P19-201ENST00000443487 500 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.17□□□□□ -2.44
CKS1BP61024 AC112206.4-201ENST00000515142 405 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.17□□□□□ -2.44
CKS1BP61024 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.17□□□□□ -2.44
CKS1BP61024 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.17□□□□□ -2.44
CKS1BP61024 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.17□□□□□ -2.44
CKS1BP61024 AC092574.1-201ENST00000609771 420 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 AC022709.1-201ENST00000615967 87 ntBASIC-0.17□□□□□ -2.44
CKS1BP61024 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.17□□□□□ -2.44
CKS1BP61024 RNU6-511P-201ENST00000363496 107 ntBASIC-0.18□□□□□ -2.44
CKS1BP61024 snoZ40.1-201ENST00000364540 72 ntBASIC-0.18□□□□□ -2.44
CKS1BP61024 SNORA2.2-201ENST00000365473 135 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms