Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SNORA75.6-201ENST00000391318 127 ntBASIC2.58□□□□□ -2
HDAC4P56524 RPS20P15-201ENST00000412792 311 ntBASIC2.58□□□□□ -2
HDAC4P56524 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.58□□□□□ -2
HDAC4P56524 AC003685.2-201ENST00000422795 395 ntBASIC2.58□□□□□ -2
HDAC4P56524 EIF4EP2-201ENST00000422816 654 ntBASIC2.58□□□□□ -2
HDAC4P56524 AC236972.2-201ENST00000434979 310 ntBASIC2.58□□□□□ -2
HDAC4P56524 RPS12P2-201ENST00000439728 269 ntBASIC2.58□□□□□ -2
HDAC4P56524 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDAC4P56524 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.58□□□□□ -2
HDAC4P56524 RPL30P15-201ENST00000457129 321 ntBASIC2.58□□□□□ -2
HDAC4P56524 AL121594.1-201ENST00000475906 575 ntBASIC2.58□□□□□ -2
HDAC4P56524 RPL30P1-201ENST00000488676 339 ntBASIC2.58□□□□□ -2
HDAC4P56524 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.58□□□□□ -2
HDAC4P56524 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.58□□□□□ -2
HDAC4P56524 AC016632.1-201ENST00000503994 196 ntBASIC2.58□□□□□ -2
HDAC4P56524 AC022447.4-201ENST00000504053 364 ntBASIC2.58□□□□□ -2
HDAC4P56524 HMGN1P13-201ENST00000505795 138 ntBASIC2.58□□□□□ -2
HDAC4P56524 AC093303.1-201ENST00000514549 295 ntBASIC2.58□□□□□ -2
HDAC4P56524 RNA5SP148-201ENST00000516527 94 ntBASIC2.58□□□□□ -2
HDAC4P56524 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
HDAC4P56524 AL078605.1-201ENST00000603529 500 ntBASIC2.58□□□□□ -2
HDAC4P56524 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
HDAC4P56524 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDAC4P56524 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDAC4P56524 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HDAC4P56524 AC092268.1-201ENST00000342691 405 ntBASIC2.57□□□□□ -2
HDAC4P56524 Y_RNA.187-201ENST00000363918 113 ntBASIC2.57□□□□□ -2
HDAC4P56524 RNU4-76P-201ENST00000364509 141 ntBASIC2.57□□□□□ -2
HDAC4P56524 RNA5SP125-201ENST00000364843 120 ntBASIC2.57□□□□□ -2
HDAC4P56524 SNORD42.2-201ENST00000365570 69 ntBASIC2.57□□□□□ -2
HDAC4P56524 Y_RNA.460-201ENST00000384255 102 ntBASIC2.57□□□□□ -2
HDAC4P56524 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
HDAC4P56524 SNORA26.3-201ENST00000391119 136 ntBASIC2.57□□□□□ -2
HDAC4P56524 RNU2-63P-201ENST00000410792 194 ntBASIC2.57□□□□□ -2
HDAC4P56524 EIF1AXP1-201ENST00000419267 435 ntBASIC2.57□□□□□ -2
HDAC4P56524 MTCO2P27-201ENST00000420740 428 ntBASIC2.57□□□□□ -2
HDAC4P56524 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.57□□□□□ -2
HDAC4P56524 MTND4P28-201ENST00000426217 387 ntBASIC2.57□□□□□ -2
HDAC4P56524 AC078809.1-201ENST00000427601 140 ntBASIC2.57□□□□□ -2
HDAC4P56524 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.57□□□□□ -2
HDAC4P56524 AC244670.1-201ENST00000436879 112 ntBASIC2.57□□□□□ -2
HDAC4P56524 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.57□□□□□ -2
HDAC4P56524 AL513328.1-201ENST00000446460 224 ntBASIC2.57□□□□□ -2
HDAC4P56524 AC140059.1-201ENST00000489238 361 ntBASIC2.57□□□□□ -2
HDAC4P56524 RNU6-1153P-201ENST00000516760 105 ntBASIC2.57□□□□□ -2
HDAC4P56524 SNORA31.16-201ENST00000516773 139 ntBASIC2.57□□□□□ -2
HDAC4P56524 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
HDAC4P56524 MIR5694-201ENST00000581190 76 ntBASIC2.57□□□□□ -2
HDAC4P56524 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.57□□□□□ -2
HDAC4P56524 PISRT1.1-201ENST00000616930 107 ntBASIC2.57□□□□□ -2
HDAC4P56524 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
HDAC4P56524 AC090574.1-201ENST00000623186 233 ntBASIC2.57□□□□□ -2
HDAC4P56524 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
HDAC4P56524 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
HDAC4P56524 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDAC4P56524 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDAC4P56524 Y_RNA.138-201ENST00000363462 102 ntBASIC2.56□□□□□ -2
HDAC4P56524 Y_RNA.504-201ENST00000384481 104 ntBASIC2.56□□□□□ -2
HDAC4P56524 MIR559-201ENST00000385188 96 ntBASIC2.56□□□□□ -2
HDAC4P56524 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.56□□□□□ -2
HDAC4P56524 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.56□□□□□ -2
HDAC4P56524 AC027575.1-201ENST00000481064 460 ntBASIC2.56□□□□□ -2
HDAC4P56524 AF186996.7-201ENST00000492781 209 ntBASIC2.56□□□□□ -2
HDAC4P56524 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
HDAC4P56524 RNU5F-2P-201ENST00000516066 82 ntBASIC2.56□□□□□ -2
HDAC4P56524 RNA5SP24-201ENST00000516478 95 ntBASIC2.56□□□□□ -2
HDAC4P56524 AC007375.1-201ENST00000554513 578 ntBASIC2.56□□□□□ -2
HDAC4P56524 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.56□□□□□ -2
HDAC4P56524 AC093249.1-201ENST00000567049 203 ntBASIC2.56□□□□□ -2
HDAC4P56524 RPL30P11-203ENST00000598995 310 ntBASIC2.56□□□□□ -2
HDAC4P56524 MIR5739-201ENST00000619803 80 ntBASIC2.56□□□□□ -2
HDAC4P56524 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HDAC4P56524 MTND5P9-201ENST00000503854 1755 ntBASIC2.56□□□□□ -2
HDAC4P56524 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
HDAC4P56524 RNU5B-2P-201ENST00000363036 113 ntBASIC2.55□□□□□ -2
HDAC4P56524 RNU6-595P-201ENST00000363944 107 ntBASIC2.55□□□□□ -2
HDAC4P56524 RNU6-142P-201ENST00000384019 107 ntBASIC2.55□□□□□ -2
HDAC4P56524 SNORA29-201ENST00000384183 140 ntBASIC2.55□□□□□ -2
HDAC4P56524 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.55□□□□□ -2
HDAC4P56524 CBX3P9-201ENST00000402326 552 ntBASIC2.55□□□□□ -2
HDAC4P56524 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
HDAC4P56524 AL354751.2-201ENST00000415471 210 ntBASIC2.55□□□□□ -2
HDAC4P56524 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.55□□□□□ -2
HDAC4P56524 MTND1P14-201ENST00000427400 950 ntBASIC2.55□□□□□ -2
HDAC4P56524 Z82188.1-201ENST00000436709 154 ntBASIC2.55□□□□□ -2
HDAC4P56524 GPM6BP3-201ENST00000442797 145 ntBASIC2.55□□□□□ -2
HDAC4P56524 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.55□□□□□ -2
HDAC4P56524 AC104564.1-201ENST00000493028 407 ntBASIC2.55□□□□□ -2
HDAC4P56524 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
HDAC4P56524 AC008413.1-201ENST00000511864 177 ntBASIC2.55□□□□□ -2
HDAC4P56524 Y_RNA.701-201ENST00000516812 110 ntBASIC2.55□□□□□ -2
HDAC4P56524 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.55□□□□□ -2
HDAC4P56524 AC016256.1-201ENST00000547971 354 ntBASIC2.55□□□□□ -2
HDAC4P56524 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.55□□□□□ -2
HDAC4P56524 MIR5701-3-201ENST00000578890 82 ntBASIC2.55□□□□□ -2
HDAC4P56524 MIR3136-201ENST00000583498 78 ntBASIC2.55□□□□□ -2
HDAC4P56524 MIR5701-1-201ENST00000585138 82 ntBASIC2.55□□□□□ -2
HDAC4P56524 AC010928.2-201ENST00000588017 287 ntBASIC2.55□□□□□ -2
HDAC4P56524 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.55□□□□□ -2
HDAC4P56524 AL670379.2-201ENST00000604983 252 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms