Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC022202.1-201ENST00000613515 211 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AL359314.1-201ENST00000616913 261 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC022306.2-201ENST00000617563 647 ntBASIC2.13□□□□□ -2.07
CDH13P55290 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC012640.5-201ENST00000623897 319 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC099654.14-201ENST00000638599 341 ntBASIC2.13□□□□□ -2.07
CDH13P55290 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CDH13P55290 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDH13P55290 MTND5P9-201ENST00000503854 1755 ntBASIC2.13□□□□□ -2.07
CDH13P55290 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
CDH13P55290 RNU1-76P-201ENST00000362903 159 ntBASIC2.12□□□□□ -2.07
CDH13P55290 Y_RNA.99-201ENST00000363138 105 ntBASIC2.12□□□□□ -2.07
CDH13P55290 RNU4-9P-201ENST00000364951 139 ntBASIC2.12□□□□□ -2.07
CDH13P55290 Y_RNA.339-201ENST00000365325 102 ntBASIC2.12□□□□□ -2.07
CDH13P55290 RNU6-301P-201ENST00000384277 107 ntBASIC2.12□□□□□ -2.07
CDH13P55290 Y_RNA.500-201ENST00000384466 111 ntBASIC2.12□□□□□ -2.07
CDH13P55290 MIR1262-201ENST00000408276 93 ntBASIC2.12□□□□□ -2.07
CDH13P55290 RNU6-174P-201ENST00000410406 106 ntBASIC2.12□□□□□ -2.07
CDH13P55290 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH13P55290 Z82205.1-201ENST00000428456 297 ntBASIC2.12□□□□□ -2.07
CDH13P55290 FTH1P25-201ENST00000447665 469 ntBASIC2.12□□□□□ -2.07
CDH13P55290 snoU13.6-201ENST00000458785 104 ntBASIC2.12□□□□□ -2.07
CDH13P55290 AC007215.1-201ENST00000464893 276 ntBASIC2.12□□□□□ -2.07
CDH13P55290 AC107032.1-201ENST00000485945 480 ntBASIC2.12□□□□□ -2.07
CDH13P55290 AC093259.1-201ENST00000509755 300 ntBASIC2.12□□□□□ -2.07
CDH13P55290 RNU7-30P-201ENST00000516835 62 ntBASIC2.12□□□□□ -2.07
CDH13P55290 AC026470.2-201ENST00000561492 181 ntBASIC2.12□□□□□ -2.07
CDH13P55290 MIR5696-201ENST00000578474 85 ntBASIC2.12□□□□□ -2.07
CDH13P55290 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
CDH13P55290 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH13P55290 MIR6128-201ENST00000615528 109 ntBASIC2.12□□□□□ -2.07
CDH13P55290 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.12□□□□□ -2.07
CDH13P55290 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH13P55290 AL133216.2-202ENST00000634512 349 ntBASIC2.12□□□□□ -2.07
CDH13P55290 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH13P55290 AC131280.1-202ENST00000624067 4211 ntBASIC2.11□□□□□ -2.07
CDH13P55290 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDH13P55290 SNORD115-32-201ENST00000364079 82 ntBASIC2.11□□□□□ -2.07
CDH13P55290 RNU6-1283P-201ENST00000365314 105 ntBASIC2.11□□□□□ -2.07
CDH13P55290 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH13P55290 SNORD14D-201ENST00000384390 87 ntBASIC2.11□□□□□ -2.07
CDH13P55290 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
CDH13P55290 RNU6-306P-201ENST00000384617 107 ntBASIC2.11□□□□□ -2.07
CDH13P55290 RNU2-41P-201ENST00000410991 178 ntBASIC2.11□□□□□ -2.07
CDH13P55290 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.11□□□□□ -2.07
CDH13P55290 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 AL358453.1-201ENST00000422522 250 ntBASIC2.11□□□□□ -2.07
CDH13P55290 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 PMCHL2-203ENST00000457791 237 ntBASIC2.11□□□□□ -2.07
CDH13P55290 AC087477.1-201ENST00000465747 340 ntBASIC2.11□□□□□ -2.07
CDH13P55290 UBE2DNL-203ENST00000474922 222 ntBASIC2.11□□□□□ -2.07
CDH13P55290 MIR449C-201ENST00000516047 92 ntBASIC2.11□□□□□ -2.07
CDH13P55290 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH13P55290 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.11□□□□□ -2.07
CDH13P55290 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 AC005668.1-201ENST00000571142 476 ntBASIC2.11□□□□□ -2.07
CDH13P55290 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH13P55290 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH13P55290 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDH13P55290 AP006437.1-201ENST00000641440 3685 ntBASIC2.11□□□□□ -2.07
CDH13P55290 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.11□□□□□ -2.07
CDH13P55290 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH13P55290 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CDH13P55290 RNU6-743P-201ENST00000364151 106 ntBASIC2.1□□□□□ -2.07
CDH13P55290 Y_RNA.332-201ENST00000365271 113 ntBASIC2.1□□□□□ -2.07
CDH13P55290 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
CDH13P55290 MIR548F5-201ENST00000408421 86 ntBASIC2.1□□□□□ -2.07
CDH13P55290 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH13P55290 AC138393.2-201ENST00000414742 246 ntBASIC2.1□□□□□ -2.07
CDH13P55290 NCOR1P3-201ENST00000420479 303 ntBASIC2.1□□□□□ -2.07
CDH13P55290 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH13P55290 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH13P55290 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH13P55290 HMGN2P18-201ENST00000450680 270 ntBASIC2.1□□□□□ -2.07
CDH13P55290 AC107399.1-201ENST00000451226 265 ntBASIC2.1□□□□□ -2.07
CDH13P55290 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH13P55290 SNORA59A-201ENST00000459326 152 ntBASIC2.1□□□□□ -2.07
CDH13P55290 RNU6-1016P-201ENST00000516689 94 ntBASIC2.1□□□□□ -2.07
CDH13P55290 SNORA20.3-201ENST00000516880 132 ntBASIC2.1□□□□□ -2.07
CDH13P55290 RNA5SP490-201ENST00000517141 136 ntBASIC2.1□□□□□ -2.07
CDH13P55290 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
CDH13P55290 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH13P55290 AC090517.1-201ENST00000569307 266 ntBASIC2.1□□□□□ -2.07
CDH13P55290 MIR4273-201ENST00000582824 84 ntBASIC2.1□□□□□ -2.07
CDH13P55290 RBM11P1-201ENST00000604951 799 ntBASIC2.1□□□□□ -2.07
CDH13P55290 uc_338.5-201ENST00000611839 155 ntBASIC2.1□□□□□ -2.07
CDH13P55290 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
CDH13P55290 MTND5P6-201ENST00000422338 1798 ntBASIC2.1□□□□□ -2.07
CDH13P55290 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH13P55290 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH13P55290 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDH13P55290 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH13P55290 SNORD115-8-201ENST00000363856 82 ntBASIC2.09□□□□□ -2.07
CDH13P55290 SNORD115-38-201ENST00000365037 82 ntBASIC2.09□□□□□ -2.07
CDH13P55290 Y_RNA.490-201ENST00000384413 102 ntBASIC2.09□□□□□ -2.07
CDH13P55290 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms