Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.48-201ENST00000362710 103 ntBASIC2.2□□□□□ -2.06
CDH11P55287 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
CDH11P55287 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH11P55287 AC012306.1-201ENST00000423267 114 ntBASIC2.2□□□□□ -2.06
CDH11P55287 Z82188.1-201ENST00000436709 154 ntBASIC2.2□□□□□ -2.06
CDH11P55287 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.2□□□□□ -2.06
CDH11P55287 Y_RNA.653-201ENST00000459091 95 ntBASIC2.2□□□□□ -2.06
CDH11P55287 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.2□□□□□ -2.06
CDH11P55287 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
CDH11P55287 RNA5SP320-201ENST00000516263 124 ntBASIC2.2□□□□□ -2.06
CDH11P55287 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.2□□□□□ -2.06
CDH11P55287 PRELID2P1-201ENST00000552837 301 ntBASIC2.2□□□□□ -2.06
CDH11P55287 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH11P55287 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
CDH11P55287 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH11P55287 AL133255.1-201ENST00000606374 441 ntBASIC2.2□□□□□ -2.06
CDH11P55287 AC116312.1-201ENST00000606841 314 ntBASIC2.2□□□□□ -2.06
CDH11P55287 AC084781.2-201ENST00000615568 161 ntBASIC2.2□□□□□ -2.06
CDH11P55287 U4.3-201ENST00000621047 82 ntBASIC2.2□□□□□ -2.06
CDH11P55287 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CDH11P55287 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH11P55287 AC233981.2-201ENST00000611524 1614 ntBASIC2.2□□□□□ -2.06
CDH11P55287 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDH11P55287 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDH11P55287 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDH11P55287 snoU2_19.1-201ENST00000362361 80 ntBASIC2.19□□□□□ -2.06
CDH11P55287 RNU6-1032P-201ENST00000384100 107 ntBASIC2.19□□□□□ -2.06
CDH11P55287 RNU6-890P-201ENST00000384121 107 ntBASIC2.19□□□□□ -2.06
CDH11P55287 U8.10-201ENST00000384260 133 ntBASIC2.19□□□□□ -2.06
CDH11P55287 MIR27B-201ENST00000385129 97 ntBASIC2.19□□□□□ -2.06
CDH11P55287 RPS26P42-201ENST00000413485 326 ntBASIC2.19□□□□□ -2.06
CDH11P55287 AC104389.3-201ENST00000445629 235 ntBASIC2.19□□□□□ -2.06
CDH11P55287 AC008549.1-201ENST00000512900 643 ntBASIC2.19□□□□□ -2.06
CDH11P55287 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
CDH11P55287 AP002770.2-201ENST00000543613 532 ntBASIC2.19□□□□□ -2.06
CDH11P55287 AC091544.4-201ENST00000555268 342 ntBASIC2.19□□□□□ -2.06
CDH11P55287 CYP4A27P-201ENST00000567218 190 ntBASIC2.19□□□□□ -2.06
CDH11P55287 AC005899.2-201ENST00000584353 90 ntBASIC2.19□□□□□ -2.06
CDH11P55287 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH11P55287 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
CDH11P55287 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDH11P55287 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDH11P55287 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
CDH11P55287 Y_RNA.187-201ENST00000363918 113 ntBASIC2.18□□□□□ -2.06
CDH11P55287 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
CDH11P55287 Y_RNA.419-201ENST00000384041 102 ntBASIC2.18□□□□□ -2.06
CDH11P55287 RNU6-1274P-201ENST00000384557 107 ntBASIC2.18□□□□□ -2.06
CDH11P55287 MIR559-201ENST00000385188 96 ntBASIC2.18□□□□□ -2.06
CDH11P55287 MTCO2P27-201ENST00000420740 428 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AC236972.2-201ENST00000434979 310 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH11P55287 RPL30P15-201ENST00000457129 321 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AC087477.1-201ENST00000465747 340 ntBASIC2.18□□□□□ -2.06
CDH11P55287 RPL30P10-201ENST00000488148 337 ntBASIC2.18□□□□□ -2.06
CDH11P55287 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH11P55287 RNU6-120P-201ENST00000516077 103 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.18□□□□□ -2.06
CDH11P55287 AC023824.2-201ENST00000566185 400 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH11P55287 PCGEM1.1-201ENST00000613431 131 ntBASIC2.18□□□□□ -2.06
CDH11P55287 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AL359314.1-201ENST00000616913 261 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AC126177.8-201ENST00000618339 1015 ntBASIC2.18□□□□□ -2.06
CDH11P55287 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH11P55287 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH11P55287 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDH11P55287 AC069528.2-201ENST00000624849 1991 ntBASIC2.18□□□□□ -2.06
CDH11P55287 SNORD115-32-201ENST00000364079 82 ntBASIC2.17□□□□□ -2.06
CDH11P55287 SNORD32B-201ENST00000364460 84 ntBASIC2.17□□□□□ -2.06
CDH11P55287 RNA5SP125-201ENST00000364843 120 ntBASIC2.17□□□□□ -2.06
CDH11P55287 RNU4-9P-201ENST00000364951 139 ntBASIC2.17□□□□□ -2.06
CDH11P55287 Y_RNA.315-201ENST00000365117 102 ntBASIC2.17□□□□□ -2.06
CDH11P55287 XGY1-201ENST00000381172 446 ntBASIC2.17□□□□□ -2.06
CDH11P55287 RNU6-378P-201ENST00000384324 107 ntBASIC2.17□□□□□ -2.06
CDH11P55287 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDH11P55287 OOSP1P1-201ENST00000423265 274 ntBASIC2.17□□□□□ -2.06
CDH11P55287 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH11P55287 AL353705.4-201ENST00000449661 238 ntBASIC2.17□□□□□ -2.06
CDH11P55287 snoU13.6-201ENST00000458785 104 ntBASIC2.17□□□□□ -2.06
CDH11P55287 TRBV12-1-201ENST00000479785 344 ntBASIC2.17□□□□□ -2.06
CDH11P55287 RNU6-567P-201ENST00000516746 107 ntBASIC2.17□□□□□ -2.06
CDH11P55287 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
CDH11P55287 AC018630.3-201ENST00000542637 96 ntBASIC2.17□□□□□ -2.06
CDH11P55287 MIR3923-201ENST00000579521 83 ntBASIC2.17□□□□□ -2.06
CDH11P55287 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH11P55287 AL138963.2-201ENST00000605137 226 ntBASIC2.17□□□□□ -2.06
CDH11P55287 MIR5739-201ENST00000619803 80 ntBASIC2.17□□□□□ -2.06
CDH11P55287 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH11P55287 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNY1P16-201ENST00000363063 111 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNU6-944P-201ENST00000364023 107 ntBASIC2.16□□□□□ -2.06
CDH11P55287 Y_RNA.394-201ENST00000383942 103 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNU6-1072P-201ENST00000384703 107 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNU6-443P-201ENST00000384780 107 ntBASIC2.16□□□□□ -2.06
CDH11P55287 MIR29B2-201ENST00000385055 81 ntBASIC2.16□□□□□ -2.06
CDH11P55287 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDH11P55287 Y_RNA.579-201ENST00000390939 94 ntBASIC2.16□□□□□ -2.06
CDH11P55287 SNORA12.2-201ENST00000391040 156 ntBASIC2.16□□□□□ -2.06
CDH11P55287 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNA5SP494-201ENST00000410653 129 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms