Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RNU6-991P-201ENST00000516168 107 ntBASIC1.55□□□□□ -2.16
APOC4P55056 MRPS36P4-201ENST00000534436 298 ntBASIC1.55□□□□□ -2.16
APOC4P55056 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.55□□□□□ -2.16
APOC4P55056 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.55□□□□□ -2.16
APOC4P55056 AC243960.4-201ENST00000600532 288 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AL158827.2-201ENST00000602494 330 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AP000654.2-201ENST00000605633 586 ntBASIC1.55□□□□□ -2.16
APOC4P55056 MIR3976-201ENST00000606807 139 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AC002553.4-201ENST00000616896 331 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AC006504.8-201ENST00000621046 635 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AL136221.1-201ENST00000621449 509 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AL691447.3-201ENST00000635020 330 ntBASIC1.55□□□□□ -2.16
APOC4P55056 AC100810.6-201ENST00000638068 285 ntBASIC1.55□□□□□ -2.16
APOC4P55056 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOC4P55056 AC027514.1-201ENST00000588561 1603 ntBASIC1.55□□□□□ -2.16
APOC4P55056 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.54□□□□□ -2.16
APOC4P55056 RNA5SP276-201ENST00000362580 94 ntBASIC1.54□□□□□ -2.16
APOC4P55056 RNU6-562P-201ENST00000362731 107 ntBASIC1.54□□□□□ -2.16
APOC4P55056 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
APOC4P55056 SNORD116-11-201ENST00000383882 92 ntBASIC1.54□□□□□ -2.16
APOC4P55056 SNORD14D-201ENST00000384390 87 ntBASIC1.54□□□□□ -2.16
APOC4P55056 Y_RNA.505-201ENST00000384489 102 ntBASIC1.54□□□□□ -2.16
APOC4P55056 MIR521-1-201ENST00000384902 87 ntBASIC1.54□□□□□ -2.16
APOC4P55056 MIR504-201ENST00000385065 83 ntBASIC1.54□□□□□ -2.16
APOC4P55056 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
APOC4P55056 MIR676-201ENST00000390702 67 ntBASIC1.54□□□□□ -2.16
APOC4P55056 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
APOC4P55056 MIR1283-2-201ENST00000408621 87 ntBASIC1.54□□□□□ -2.16
APOC4P55056 RNU2-40P-201ENST00000410833 196 ntBASIC1.54□□□□□ -2.16
APOC4P55056 RNU2-41P-201ENST00000410991 178 ntBASIC1.54□□□□□ -2.16
APOC4P55056 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.54□□□□□ -2.16
APOC4P55056 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.54□□□□□ -2.16
APOC4P55056 RPL23AP6-201ENST00000446637 472 ntBASIC1.54□□□□□ -2.16
APOC4P55056 HMGN2P18-201ENST00000450680 270 ntBASIC1.54□□□□□ -2.16
APOC4P55056 snoU13.15-201ENST00000459407 104 ntBASIC1.54□□□□□ -2.16
APOC4P55056 RPL23AP42-201ENST00000471152 471 ntBASIC1.54□□□□□ -2.16
APOC4P55056 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.54□□□□□ -2.16
APOC4P55056 RNU6-864P-201ENST00000516256 108 ntBASIC1.54□□□□□ -2.16
APOC4P55056 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.54□□□□□ -2.16
APOC4P55056 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.54□□□□□ -2.16
APOC4P55056 FGF7P1-201ENST00000582820 288 ntBASIC1.54□□□□□ -2.16
APOC4P55056 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.54□□□□□ -2.16
APOC4P55056 AC009033.1-201ENST00000624279 431 ntBASIC1.54□□□□□ -2.16
APOC4P55056 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.54□□□□□ -2.16
APOC4P55056 SNORD115-3-201ENST00000363100 82 ntBASIC1.53□□□□□ -2.16
APOC4P55056 Y_RNA.99-201ENST00000363138 105 ntBASIC1.53□□□□□ -2.16
APOC4P55056 SNORA8-201ENST00000384574 139 ntBASIC1.53□□□□□ -2.16
APOC4P55056 MIR208B-201ENST00000401172 77 ntBASIC1.53□□□□□ -2.16
APOC4P55056 AL356432.1-201ENST00000405809 419 ntBASIC1.53□□□□□ -2.16
APOC4P55056 Y_RNA.599-201ENST00000410489 109 ntBASIC1.53□□□□□ -2.16
APOC4P55056 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
APOC4P55056 AC244636.1-201ENST00000421152 228 ntBASIC1.53□□□□□ -2.16
APOC4P55056 EIF4EP2-201ENST00000422816 654 ntBASIC1.53□□□□□ -2.16
APOC4P55056 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
APOC4P55056 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APOC4P55056 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 snoU13.6-201ENST00000458785 104 ntBASIC1.53□□□□□ -2.16
APOC4P55056 ATP5EP1-201ENST00000510257 156 ntBASIC1.53□□□□□ -2.16
APOC4P55056 RNU6-1088P-201ENST00000516850 104 ntBASIC1.53□□□□□ -2.16
APOC4P55056 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APOC4P55056 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
APOC4P55056 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.53□□□□□ -2.16
APOC4P55056 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 AC146944.4-201ENST00000602697 718 ntBASIC1.53□□□□□ -2.16
APOC4P55056 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.53□□□□□ -2.16
APOC4P55056 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.53□□□□□ -2.16
APOC4P55056 SNORD50.1-201ENST00000362987 71 ntBASIC1.52□□□□□ -2.17
APOC4P55056 Y_RNA.332-201ENST00000365271 113 ntBASIC1.52□□□□□ -2.17
APOC4P55056 RNU6-933P-201ENST00000384424 107 ntBASIC1.52□□□□□ -2.17
APOC4P55056 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOC4P55056 AL357139.1-201ENST00000407792 426 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC009161.1-201ENST00000417306 376 ntBASIC1.52□□□□□ -2.17
APOC4P55056 HMGN2P19-201ENST00000425149 265 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.52□□□□□ -2.17
APOC4P55056 FGF7P6-202ENST00000451282 293 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 PCMTD1P1-201ENST00000455560 355 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC130509.1-201ENST00000464158 433 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC069439.1-201ENST00000494739 167 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 RNU6-1098P-201ENST00000516772 96 ntBASIC1.52□□□□□ -2.17
APOC4P55056 RNA5SP490-201ENST00000517141 136 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 AP005639.2-201ENST00000527592 928 ntBASIC1.52□□□□□ -2.17
APOC4P55056 AC087441.2-201ENST00000529141 262 ntBASIC1.52□□□□□ -2.17
APOC4P55056 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.52□□□□□ -2.17
APOC4P55056 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.52□□□□□ -2.17
APOC4P55056 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
APOC4P55056 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.52□□□□□ -2.17
APOC4P55056 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.52□□□□□ -2.17
APOC4P55056 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.52□□□□□ -2.17
APOC4P55056 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms