Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MIR378F-201ENST00000578143 78 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 MIR3612-201ENST00000579753 87 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 MIR4300-201ENST00000581016 96 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 AC004223.2-201ENST00000590309 544 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 AC107952.2-201ENST00000606048 486 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 MIR1-1-201ENST00000362147 71 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.21□□□□□ -2.6
CLTCL1P53675 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 ACA59.2-201ENST00000517061 156 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.21□□□□□ -2.6
CLTCL1P53675 MIR3136-201ENST00000583498 78 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 MTND3P19-201ENST00000603825 345 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 AC009318.4-201ENST00000620496 486 ntBASIC-1.21□□□□□ -2.6
CLTCL1P53675 MTND5P31-201ENST00000419366 1374 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 MIR1827-201ENST00000408549 66 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 RNA5SP163-201ENST00000410304 99 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 RPL32P14-201ENST00000463196 378 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 AC022616.3-201ENST00000523940 148 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 C1DP5-201ENST00000525775 383 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 NAMPTP3-201ENST00000569273 224 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 MIR4436A-201ENST00000585278 85 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 SCARNA4-202ENST00000625402 129 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 AL590396.4-201ENST00000636779 956 ntBASIC-1.22□□□□□ -2.6
CLTCL1P53675 MIR365A-201ENST00000362260 87 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 AC083799.1-201ENST00000366451 910 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 MIR196A1-201ENST00000388006 70 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 TAF13P2-201ENST00000416876 286 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 ARL5AP1-201ENST00000418991 388 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 CECR9-201ENST00000453421 199 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU6-848P-201ENST00000515948 107 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU1-86P-201ENST00000516108 154 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU6-617P-201ENST00000516147 107 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU6-473P-201ENST00000516164 107 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU1-107P-201ENST00000516617 154 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 RNU6-180P-201ENST00000516697 61 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.22□□□□□ -2.61
CLTCL1P53675 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.22□□□□□ -2.61
CLTCL1P53675 AP002360.4-201ENST00000606980 481 ntBASIC-1.22□□□□□ -2.61
CLTCL1P53675 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.22□□□□□ -2.61
CLTCL1P53675 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.22□□□□□ -2.61
CLTCL1P53675 SNORA25.7-201ENST00000364375 127 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 RNU6-652P-201ENST00000365488 107 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 RNU6-505P-201ENST00000384427 107 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 MIR649-201ENST00000384843 97 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 RNU2-15P-201ENST00000410692 191 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.23□□□□□ -2.61
CLTCL1P53675 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.23□□□□□ -2.61
CLTCL1P53675 MTND1P30-201ENST00000441241 901 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.23□□□□□ -2.61
CLTCL1P53675 RNU6-703P-201ENST00000516946 107 ntBASIC-1.23□□□□□ -2.61
CLTCL1P53675 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.23□□□□□ -2.61
CLTCL1P53675 SMIM11P1-201ENST00000369586 178 ntBASIC-1.24□□□□□ -2.61
CLTCL1P53675 RNU6-480P-201ENST00000384332 107 ntBASIC-1.24□□□□□ -2.61
CLTCL1P53675 RNU4-27P-201ENST00000410889 139 ntBASIC-1.24□□□□□ -2.61
CLTCL1P53675 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.24□□□□□ -2.61
CLTCL1P53675 MTCO1P20-201ENST00000425366 358 ntBASIC-1.24□□□□□ -2.61
CLTCL1P53675 AC013828.2-201ENST00000532487 235 ntBASIC-1.24□□□□□ -2.61
CLTCL1P53675 AC004832.4-201ENST00000608952 331 ntBASIC-1.24□□□□□ -2.61
CLTCL1P53675 AL357139.1-201ENST00000407792 426 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.25□□□□□ -2.61
CLTCL1P53675 ELOCP14-201ENST00000428070 331 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 ELOCP7-201ENST00000439968 331 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.25□□□□□ -2.61
CLTCL1P53675 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 AC116655.1-201ENST00000508324 901 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 SNORD60.2-201ENST00000516883 86 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 RNA5SP94-201ENST00000516917 108 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 AC090049.2-201ENST00000550377 109 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 MIR3165-201ENST00000579874 75 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 U4.2-201ENST00000618561 85 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 MIR6738-201ENST00000619620 64 ntBASIC-1.25□□□□□ -2.61
CLTCL1P53675 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 RNU6-925P-201ENST00000384629 104 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 RNU4-30P-201ENST00000410245 143 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 HMGN3P1-201ENST00000453847 193 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 MTND5P13-201ENST00000513046 1079 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 MIR499B-201ENST00000636498 73 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 RNA5SP323-201ENST00000391094 133 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 RNU6-994P-201ENST00000410507 111 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-1.26□□□□□ -2.61
CLTCL1P53675 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.26□□□□□ -2.61
CLTCL1P53675 AL163973.1-201ENST00000484753 577 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.26□□□□□ -2.61
CLTCL1P53675 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.26□□□□□ -2.61
CLTCL1P53675 TPRKBP2-201ENST00000565969 475 ntBASIC-1.26□□□□□ -2.61
CLTCL1P53675 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.27□□□□□ -2.61
CLTCL1P53675 AC069271.1-201ENST00000445577 156 ntBASIC-1.27□□□□□ -2.61
CLTCL1P53675 SPINT5P-201ENST00000448174 155 ntBASIC-1.27□□□□□ -2.61
CLTCL1P53675 RNU7-34P-201ENST00000459394 64 ntBASIC-1.27□□□□□ -2.61
CLTCL1P53675 AC009646.1-201ENST00000510455 318 ntBASIC-1.27□□□□□ -2.61
CLTCL1P53675 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.27□□□□□ -2.61
CLTCL1P53675 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms