Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
LIMK1P53667 AC146944.4-201ENST00000602697 718 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 AC078795.3-201ENST00000602913 472 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 U6atac.1-201ENST00000616025 117 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 AC002553.4-201ENST00000616896 331 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.18□□□□□ -2.06
LIMK1P53667 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LIMK1P53667 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LIMK1P53667 RNU6-562P-201ENST00000362731 107 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 SNORD115-3-201ENST00000363100 82 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 RNU6-1013P-201ENST00000384180 107 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 Y_RNA.466-201ENST00000384294 113 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 SNORA67.3-201ENST00000384366 140 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 MIR499A-201ENST00000384903 122 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 AC108667.1-201ENST00000428618 249 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 IFNA20P-201ENST00000436840 528 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.17□□□□□ -2.06
LIMK1P53667 MTND4LP16-201ENST00000440828 295 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 AL353572.1-201ENST00000442490 417 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.17□□□□□ -2.06
LIMK1P53667 RPL23AP3-201ENST00000453844 468 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.17□□□□□ -2.06
LIMK1P53667 RPL36AP21-201ENST00000490372 323 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.17□□□□□ -2.06
LIMK1P53667 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
LIMK1P53667 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
LIMK1P53667 RNU6-1314P-201ENST00000517139 104 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.17□□□□□ -2.06
LIMK1P53667 AC243960.4-201ENST00000600532 288 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 SNRPGP17-201ENST00000603780 214 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LIMK1P53667 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LIMK1P53667 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LIMK1P53667 CENPCP1-201ENST00000533085 2578 ntBASIC2.17□□□□□ -2.06
LIMK1P53667 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
LIMK1P53667 SNORA36A-201ENST00000384221 132 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 SNORA12-201ENST00000391162 147 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LIMK1P53667 MIR208B-201ENST00000401172 77 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AL356432.1-201ENST00000405809 419 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 CYCSP49-201ENST00000420810 319 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 Z82205.1-201ENST00000428456 297 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AL445646.1-201ENST00000431784 216 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AL645568.3-201ENST00000433683 316 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 MTCO3P18-201ENST00000440206 761 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.16□□□□□ -2.06
LIMK1P53667 NFU1P2-201ENST00000448700 469 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AL137159.1-201ENST00000452808 512 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 MIR449C-201ENST00000516047 92 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AC233702.2-202ENST00000562547 291 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 MIR3672-201ENST00000584290 82 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AP003465.2-201ENST00000602571 373 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 Z98751.3-201ENST00000604447 521 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 AP000654.2-201ENST00000605633 586 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 MIR3976-201ENST00000606807 139 ntBASIC2.16□□□□□ -2.06
LIMK1P53667 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LIMK1P53667 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
LIMK1P53667 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
LIMK1P53667 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIMK1P53667 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LIMK1P53667 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 RNY1P10-201ENST00000363268 113 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 Y_RNA.151-201ENST00000363566 112 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 U3.9-201ENST00000363823 204 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 RNU6-611P-201ENST00000384276 104 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 MIR518A2-201ENST00000384966 87 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LIMK1P53667 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LIMK1P53667 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIMK1P53667 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 RNU6-321P-201ENST00000410912 106 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 AC012306.1-201ENST00000423267 114 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 RNU7-187P-201ENST00000458985 68 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 RNA5SP182-201ENST00000516064 82 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 SCARNA16.3-201ENST00000516595 184 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 MTND4LP26-201ENST00000518144 282 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 GNAI2P1-201ENST00000541815 315 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.15□□□□□ -2.07
LIMK1P53667 CYP4A27P-201ENST00000567218 190 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 AL078605.1-201ENST00000603529 500 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 MIR8076-201ENST00000611401 83 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 AC122108.2-201ENST00000611946 526 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 AL138726.1-201ENST00000614873 333 ntBASIC2.15□□□□□ -2.07
LIMK1P53667 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIMK1P53667 RNU1-51P-201ENST00000365345 176 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LIMK1P53667 SNORA51.11-201ENST00000384442 131 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 RNU6-1093P-201ENST00000391194 107 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC019129.1-201ENST00000403786 261 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms