Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 Y_RNA.148-201ENST00000363557 117 ntBASIC2.53□□□□□ -2
CLCN3P51790 RNU6-933P-201ENST00000384424 107 ntBASIC2.53□□□□□ -2
CLCN3P51790 MIR218-1-201ENST00000384999 110 ntBASIC2.53□□□□□ -2
CLCN3P51790 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCN3P51790 AL591034.2-201ENST00000402839 359 ntBASIC2.53□□□□□ -2
CLCN3P51790 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
CLCN3P51790 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.53□□□□□ -2
CLCN3P51790 AC008267.5-201ENST00000424928 265 ntBASIC2.53□□□□□ -2
CLCN3P51790 AL035666.1-201ENST00000446195 348 ntBASIC2.53□□□□□ -2
CLCN3P51790 MIR2053-201ENST00000459295 91 ntBASIC2.53□□□□□ -2
CLCN3P51790 RPL30P12-201ENST00000474666 353 ntBASIC2.53□□□□□ -2
CLCN3P51790 AL121594.1-201ENST00000475906 575 ntBASIC2.53□□□□□ -2
CLCN3P51790 RPL30P1-201ENST00000488676 339 ntBASIC2.53□□□□□ -2
CLCN3P51790 YWHAEP4-201ENST00000505390 198 ntBASIC2.53□□□□□ -2
CLCN3P51790 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.53□□□□□ -2
CLCN3P51790 RNU6-470P-201ENST00000515954 104 ntBASIC2.53□□□□□ -2
CLCN3P51790 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.53□□□□□ -2
CLCN3P51790 AC016256.1-201ENST00000547971 354 ntBASIC2.53□□□□□ -2
CLCN3P51790 SUB1P3-201ENST00000564581 315 ntBASIC2.53□□□□□ -2
CLCN3P51790 AC109446.1-201ENST00000566172 220 ntBASIC2.53□□□□□ -2
CLCN3P51790 MIR1273D-201ENST00000577266 86 ntBASIC2.53□□□□□ -2
CLCN3P51790 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.53□□□□□ -2
CLCN3P51790 RPL23AP88-201ENST00000605759 454 ntBASIC2.53□□□□□ -2
CLCN3P51790 MIR3976-201ENST00000606807 139 ntBASIC2.53□□□□□ -2
CLCN3P51790 AC005014.2-201ENST00000607795 599 ntBASIC2.53□□□□□ -2
CLCN3P51790 PART1_1.1-201ENST00000611761 217 ntBASIC2.53□□□□□ -2
CLCN3P51790 PISRT1.1-201ENST00000616930 107 ntBASIC2.53□□□□□ -2
CLCN3P51790 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN3P51790 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN3P51790 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
CLCN3P51790 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.52□□□□□ -2.01
CLCN3P51790 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLCN3P51790 AC092268.1-201ENST00000342691 405 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLCN3P51790 RNU6-212P-201ENST00000362642 104 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 RNU1-72P-201ENST00000362976 153 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 SNORD50.1-201ENST00000362987 71 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 Y_RNA.162-201ENST00000363683 102 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 BTF3L4P2-201ENST00000392798 346 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 RPL21P75-201ENST00000396599 483 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 RPL21P28-201ENST00000401418 483 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCN3P51790 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN3P51790 AC010095.1-201ENST00000443543 144 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AL031659.1-201ENST00000447075 539 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC079354.2-201ENST00000453523 154 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 RPL21P39-201ENST00000463605 483 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC087190.1-201ENST00000484462 480 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC093591.1-201ENST00000491435 481 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 RPL21P16-201ENST00000495531 483 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN3P51790 RNU6-120P-201ENST00000516077 103 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AP005902.1-201ENST00000521358 186 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 HSPE1P20-201ENST00000538133 289 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 MIR3124-201ENST00000582636 67 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 MIR3136-201ENST00000583498 78 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC005899.2-201ENST00000584353 90 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.52□□□□□ -2.01
CLCN3P51790 AL158827.2-201ENST00000602494 330 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC018889.1-201ENST00000605372 397 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 MIR8076-201ENST00000611401 83 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 AL691447.3-201ENST00000635020 330 ntBASIC2.52□□□□□ -2.01
CLCN3P51790 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLCN3P51790 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCN3P51790 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLCN3P51790 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.52□□□□□ -2.01
CLCN3P51790 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLCN3P51790 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLCN3P51790 Y_RNA.40-201ENST00000362645 93 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 RNU6-490P-201ENST00000362985 107 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 Y_RNA.202-201ENST00000364083 110 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 RNU6-784P-201ENST00000384330 106 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 RNU6-1160P-201ENST00000384546 104 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 MIR221-201ENST00000385135 110 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 RNU6-308P-201ENST00000390957 107 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 SNORA26.3-201ENST00000391119 136 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCN3P51790 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCN3P51790 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.51□□□□□ -2.01
CLCN3P51790 EIF1AXP1-201ENST00000419267 435 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCN3P51790 DPH3P2-201ENST00000422618 250 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 AC003685.2-201ENST00000422795 395 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 EIF4EP2-201ENST00000422816 654 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 AC244670.1-201ENST00000436879 112 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCN3P51790 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLCN3P51790 MTND4P19-201ENST00000446659 478 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLCN3P51790 HMGN1P10-201ENST00000474557 553 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.51□□□□□ -2.01
CLCN3P51790 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCN3P51790 AC016632.1-201ENST00000503994 196 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 SNORA25.11-201ENST00000515935 105 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCN3P51790 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 MIR5701-3-201ENST00000578890 82 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 MIR4648-201ENST00000580107 72 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms