Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 AC009033.1-201ENST00000624279 431 ntBASIC1.9□□□□□ -2.11
FNTAP49354 AL450472.1-202ENST00000637286 180 ntBASIC1.9□□□□□ -2.11
FNTAP49354 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.9□□□□□ -2.11
FNTAP49354 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
FNTAP49354 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
FNTAP49354 RNU6-214P-201ENST00000384130 107 ntBASIC1.89□□□□□ -2.11
FNTAP49354 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
FNTAP49354 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
FNTAP49354 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
FNTAP49354 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
FNTAP49354 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.89□□□□□ -2.11
FNTAP49354 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
FNTAP49354 AL137159.1-201ENST00000452808 512 ntBASIC1.89□□□□□ -2.11
FNTAP49354 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.89□□□□□ -2.11
FNTAP49354 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
FNTAP49354 ANXA2P1-201ENST00000505539 926 ntBASIC1.89□□□□□ -2.11
FNTAP49354 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.89□□□□□ -2.11
FNTAP49354 Y_RNA.682-201ENST00000516457 100 ntBASIC1.89□□□□□ -2.11
FNTAP49354 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.89□□□□□ -2.11
FNTAP49354 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
FNTAP49354 MIR4801-201ENST00000582704 82 ntBASIC1.89□□□□□ -2.11
FNTAP49354 AC091135.1-201ENST00000585943 307 ntBASIC1.89□□□□□ -2.11
FNTAP49354 AL078605.1-201ENST00000603529 500 ntBASIC1.89□□□□□ -2.11
FNTAP49354 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.89□□□□□ -2.11
FNTAP49354 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
FNTAP49354 CBX3P1-201ENST00000325243 554 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RNU6-562P-201ENST00000362731 107 ntBASIC1.88□□□□□ -2.11
FNTAP49354 U8.2-201ENST00000363156 134 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RNU6-1059P-201ENST00000363752 98 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RNU6-944P-201ENST00000364023 107 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.88□□□□□ -2.11
FNTAP49354 MIR504-201ENST00000385065 83 ntBASIC1.88□□□□□ -2.11
FNTAP49354 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
FNTAP49354 FGF7P8-201ENST00000402994 292 ntBASIC1.88□□□□□ -2.11
FNTAP49354 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RN7SKP223-201ENST00000410582 62 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RPS20P15-201ENST00000412792 311 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AC138393.2-201ENST00000414742 246 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AL158823.1-201ENST00000418441 478 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.88□□□□□ -2.11
FNTAP49354 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
FNTAP49354 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.88□□□□□ -2.11
FNTAP49354 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 snoU13.14-201ENST00000459372 104 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RNU6-1037P-201ENST00000459571 107 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AC130509.1-201ENST00000464158 433 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AC079140.5-201ENST00000507882 310 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AC008549.1-201ENST00000512900 643 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RN7SKP256-201ENST00000517201 314 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.88□□□□□ -2.11
FNTAP49354 MRPS36P4-201ENST00000534436 298 ntBASIC1.88□□□□□ -2.11
FNTAP49354 CPDP1-201ENST00000579660 283 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AC011712.1-201ENST00000588959 234 ntBASIC1.88□□□□□ -2.11
FNTAP49354 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.88□□□□□ -2.11
FNTAP49354 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
FNTAP49354 AC063943.3-201ENST00000615562 356 ntBASIC1.88□□□□□ -2.11
FNTAP49354 AC099654.14-201ENST00000638599 341 ntBASIC1.88□□□□□ -2.11
FNTAP49354 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.87□□□□□ -2.11
FNTAP49354 RNA5SP276-201ENST00000362580 94 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RNU6-655P-201ENST00000362858 107 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RNU6-1274P-201ENST00000384557 107 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RNU6-1222P-201ENST00000384615 107 ntBASIC1.87□□□□□ -2.11
FNTAP49354 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FNTAP49354 MTND3P8-201ENST00000412909 339 ntBASIC1.87□□□□□ -2.11
FNTAP49354 AC009161.1-201ENST00000417306 376 ntBASIC1.87□□□□□ -2.11
FNTAP49354 DPH3P2-201ENST00000422618 250 ntBASIC1.87□□□□□ -2.11
FNTAP49354 UBE2V1P4-201ENST00000425374 344 ntBASIC1.87□□□□□ -2.11
FNTAP49354 MTCO3P46-201ENST00000425787 232 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RPL23AP95-201ENST00000426806 265 ntBASIC1.87□□□□□ -2.11
FNTAP49354 Z82205.1-201ENST00000428456 297 ntBASIC1.87□□□□□ -2.11
FNTAP49354 MTND4P17-201ENST00000470444 350 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RPL30P1-201ENST00000488676 339 ntBASIC1.87□□□□□ -2.11
FNTAP49354 AC096745.1-201ENST00000509945 370 ntBASIC1.87□□□□□ -2.11
FNTAP49354 AC005741.1-201ENST00000511094 432 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RNU6-566P-201ENST00000516790 107 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RNU7-30P-201ENST00000516835 62 ntBASIC1.87□□□□□ -2.11
FNTAP49354 SNORA20.3-201ENST00000516880 132 ntBASIC1.87□□□□□ -2.11
FNTAP49354 RNA5SP454-201ENST00000517231 127 ntBASIC1.87□□□□□ -2.11
FNTAP49354 HSPE1P4-201ENST00000550617 308 ntBASIC1.87□□□□□ -2.11
FNTAP49354 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.87□□□□□ -2.11
FNTAP49354 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.87□□□□□ -2.11
FNTAP49354 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.87□□□□□ -2.11
FNTAP49354 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.87□□□□□ -2.11
FNTAP49354 MIR4299-201ENST00000577899 72 ntBASIC1.87□□□□□ -2.11
FNTAP49354 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
FNTAP49354 AL133215.3-201ENST00000609801 448 ntBASIC1.87□□□□□ -2.11
FNTAP49354 AC093913.1-201ENST00000614178 329 ntBASIC1.87□□□□□ -2.11
FNTAP49354 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
FNTAP49354 RNU4-15P-201ENST00000362613 141 ntBASIC1.86□□□□□ -2.11
FNTAP49354 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
FNTAP49354 RNU6-128P-201ENST00000383976 107 ntBASIC1.86□□□□□ -2.11
FNTAP49354 Y_RNA.504-201ENST00000384481 104 ntBASIC1.86□□□□□ -2.11
FNTAP49354 SNORA12-201ENST00000391162 147 ntBASIC1.86□□□□□ -2.11
FNTAP49354 RNU4-14P-201ENST00000410858 122 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms