Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL12P48061 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL12P48061 USP9YP14-201ENST00000430663 563 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 VN1R108P-201ENST00000431580 830 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL12P48061 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL12P48061 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.35□□□□□ -2.19
CXCL12P48061 AC022447.4-201ENST00000504053 364 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC079140.5-201ENST00000507882 310 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC093259.1-201ENST00000509755 300 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL12P48061 RNU6-970P-201ENST00000516312 107 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL12P48061 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.35□□□□□ -2.19
CXCL12P48061 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL12P48061 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.35□□□□□ -2.19
CXCL12P48061 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL12P48061 VN1R107P-201ENST00000601784 209 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC017083.3-201ENST00000609955 700 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 AC022709.1-201ENST00000615967 87 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 MIR6515-201ENST00000619843 57 ntBASIC1.35□□□□□ -2.19
CXCL12P48061 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL12P48061 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CXCL12P48061 RNU1-93P-201ENST00000364704 169 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 RNU6-142P-201ENST00000384019 107 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 RNU6-203P-201ENST00000384038 104 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 MIR29C-201ENST00000385231 88 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 RNU11-3P-201ENST00000391111 133 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 SRIP3-201ENST00000413200 219 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL12P48061 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL12P48061 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL12P48061 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL12P48061 MTCO3P38-201ENST00000468910 766 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 COX6CP14-201ENST00000469580 174 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 AC027575.1-201ENST00000481064 460 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 RPL39P5-202ENST00000512505 151 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL12P48061 AL118558.2-201ENST00000556294 238 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 MIR4285-201ENST00000581001 85 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 MIR3941-201ENST00000582572 103 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 AL078605.1-201ENST00000603529 500 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL12P48061 AC068792.1-201ENST00000621354 417 ntBASIC1.34□□□□□ -2.19
CXCL12P48061 MTND5P26-201ENST00000426018 1752 ntBASIC1.34□□□□□ -2.2
CXCL12P48061 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL12P48061 SNORD37.1-201ENST00000390968 65 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 RN7SKP61-201ENST00000410642 295 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 RNU2-66P-201ENST00000410650 161 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL12P48061 AC245102.2-201ENST00000448956 180 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 TPTE2P5-203ENST00000458118 728 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 MTCYBP18-201ENST00000501056 747 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 SNORA14.1-201ENST00000516113 141 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 RNU6-405P-201ENST00000516637 110 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.33□□□□□ -2.2
CXCL12P48061 AC104383.1-201ENST00000530297 370 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AL137100.2-201ENST00000555786 315 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL12P48061 MIR3136-201ENST00000583498 78 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 PIGPP4-201ENST00000584447 307 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AC078795.3-201ENST00000602913 472 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AC080078.3-201ENST00000605407 463 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AP001330.5-201ENST00000607176 411 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 Z99129.1-201ENST00000612510 255 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 AL773524.1-201ENST00000614065 229 ntBASIC1.33□□□□□ -2.2
CXCL12P48061 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.33□□□□□ -2.2
CXCL12P48061 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
CXCL12P48061 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL12P48061 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.32□□□□□ -2.2
CXCL12P48061 SNORA69-201ENST00000383895 132 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 RNU6-259P-201ENST00000383999 107 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 RNU6-38P-201ENST00000384085 107 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 SNORA36A-201ENST00000384221 132 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 Y_RNA.504-201ENST00000384481 104 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 MIR520E-201ENST00000384867 87 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AC244636.1-201ENST00000421152 228 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 RPL23AP95-201ENST00000426806 265 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AC078809.1-201ENST00000427601 140 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 HSPE1P21-201ENST00000438283 308 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.32□□□□□ -2.2
CXCL12P48061 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.32□□□□□ -2.2
CXCL12P48061 HMGN2P18-201ENST00000450680 270 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.32□□□□□ -2.2
CXCL12P48061 RNA5SP401-201ENST00000515920 127 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.32□□□□□ -2.2
CXCL12P48061 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.32□□□□□ -2.2
CXCL12P48061 AP003034.1-201ENST00000534621 422 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.32□□□□□ -2.2
CXCL12P48061 FAM106DP-201ENST00000586416 501 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AC073413.2-201ENST00000604332 360 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms