Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.11□□□□□ -2.07
NKX2-1P43699 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-1P43699 SNRPGP7-201ENST00000469016 106 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.11□□□□□ -2.07
NKX2-1P43699 FO393415.2-201ENST00000480085 343 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-1P43699 RNU6-911P-201ENST00000516523 104 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 RNU6-1213P-201ENST00000517075 94 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 RNU6-264P-201ENST00000517134 104 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 MIR2355-201ENST00000517199 87 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-1P43699 AC023442.1-201ENST00000531247 422 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AC022616.8-201ENST00000533569 253 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 NDUFA5P6-201ENST00000542110 379 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AC022080.3-201ENST00000544433 482 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AC010928.2-201ENST00000588017 287 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 SNRPGP17-201ENST00000603780 214 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX2-1P43699 AL049779.4-201ENST00000604500 156 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 PCGEM1.1-201ENST00000613431 131 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AC090971.5-201ENST00000621102 293 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 AC243829.7-201ENST00000633081 225 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX2-1P43699 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NKX2-1P43699 RNU6-694P-201ENST00000364071 147 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 SNORA25B-201ENST00000365507 128 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 SNORA70.4-201ENST00000365509 134 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 XGY1-201ENST00000381172 446 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 RNU6-546P-201ENST00000383991 107 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 Y_RNA.419-201ENST00000384041 102 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 RNU6-1032P-201ENST00000384100 107 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 RNU6-611P-201ENST00000384276 104 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 Y_RNA.473-201ENST00000384333 102 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AL138827.1-201ENST00000402666 306 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AC096664.2-201ENST00000411843 406 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 MTND1P14-201ENST00000427400 950 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 ARL5AP4-201ENST00000430731 512 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AC005534.2-201ENST00000431047 433 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 CR769767.1-201ENST00000436337 346 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 RPS3AP12-201ENST00000443616 753 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX2-1P43699 S100A11P2-201ENST00000467589 312 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX2-1P43699 AC022493.2-201ENST00000506122 481 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX2-1P43699 SNORA31.16-201ENST00000516773 139 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 RNA5SP54-201ENST00000516951 92 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 SNORA70.24-201ENST00000517233 118 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AC034114.1-201ENST00000520293 285 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NKX2-1P43699 SNRPGP18-201ENST00000553000 214 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 AC092608.2-201ENST00000624427 218 ntBASIC2.1□□□□□ -2.07
NKX2-1P43699 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NKX2-1P43699 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NKX2-1P43699 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NKX2-1P43699 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NKX2-1P43699 BX322639.1-202ENST00000423987 2213 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NKX2-1P43699 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NKX2-1P43699 SNORD32B-201ENST00000364460 84 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 Y_RNA.333-201ENST00000365274 102 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 RNU1-148P-201ENST00000384472 162 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 MIR153-2-201ENST00000385225 87 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 RNA5SP213-201ENST00000391031 106 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 RNU6-700P-201ENST00000391043 107 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 MIR1302-11-201ENST00000408051 138 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 MIR1302-9-201ENST00000408365 138 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 MIR1302-10-201ENST00000408734 138 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 RNA5SP21-201ENST00000410917 96 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AL354751.2-201ENST00000415471 210 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 Z82205.1-201ENST00000428456 297 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX2-1P43699 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AL353705.4-201ENST00000449661 238 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AC087477.1-201ENST00000465747 340 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AC018868.1-201ENST00000491307 315 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AC021146.2-201ENST00000504736 556 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX2-1P43699 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.09□□□□□ -2.07
NKX2-1P43699 RNU6-475P-201ENST00000516073 104 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 EIF4A1P12-201ENST00000551910 141 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.09□□□□□ -2.07
NKX2-1P43699 MIR1302-2-201ENST00000607096 138 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 AC100812.1-201ENST00000607622 580 ntBASIC2.09□□□□□ -2.07
NKX2-1P43699 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
NKX2-1P43699 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
NKX2-1P43699 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
NKX2-1P43699 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.08
NKX2-1P43699 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
NKX2-1P43699 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.08□□□□□ -2.08
NKX2-1P43699 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NKX2-1P43699 RNU1-23P-201ENST00000363361 144 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 U3.9-201ENST00000363823 204 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 MIR23A-201ENST00000385245 73 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 MIR190B-201ENST00000401119 79 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 Y_RNA.597-201ENST00000410463 100 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms