Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.2□□□□□ -2.22
BRCA1P38398 AC016632.1-201ENST00000503994 196 ntBASIC1.2□□□□□ -2.22
BRCA1P38398 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.2□□□□□ -2.22
BRCA1P38398 DEFB108E-201ENST00000524692 240 ntBASIC1.2□□□□□ -2.22
BRCA1P38398 AP005597.4-201ENST00000526762 229 ntBASIC1.2□□□□□ -2.22
BRCA1P38398 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.2□□□□□ -2.22
BRCA1P38398 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.2□□□□□ -2.22
BRCA1P38398 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
BRCA1P38398 PCGEM1.1-201ENST00000613431 131 ntBASIC1.2□□□□□ -2.22
BRCA1P38398 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.2□□□□□ -2.22
BRCA1P38398 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.19□□□□□ -2.22
BRCA1P38398 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
BRCA1P38398 RNU6-692P-201ENST00000384496 107 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
BRCA1P38398 RNU6-550P-201ENST00000391057 101 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 CST2P1-201ENST00000425770 87 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 AL133396.1-201ENST00000432048 687 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 SNAP23P1-201ENST00000433229 246 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 AC104850.1-201ENST00000435940 476 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 AC087477.1-201ENST00000465747 340 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.19□□□□□ -2.22
BRCA1P38398 RNU6-759P-201ENST00000516740 103 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 AC106038.2-201ENST00000520706 568 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 AL022161.1-201ENST00000604390 213 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 AL391262.2-201ENST00000622466 494 ntBASIC1.19□□□□□ -2.22
BRCA1P38398 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 RNU6-456P-201ENST00000384493 107 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 RNU6-903P-201ENST00000391270 109 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 MTCYBP2-201ENST00000407745 171 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 AC123900.1-201ENST00000420390 96 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 UBE2V1P8-201ENST00000437166 265 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.18□□□□□ -2.22
BRCA1P38398 PRPS1P1-201ENST00000445305 876 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 MTND3P7-201ENST00000474435 343 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 RNA5SP476-201ENST00000516613 103 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 CBX3P8-201ENST00000532412 525 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 AL356057.1-201ENST00000533798 831 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 MIR1273G-201ENST00000577677 100 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 MIR5094-201ENST00000578766 85 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 AC107304.1-201ENST00000604229 296 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
BRCA1P38398 AL159152.1-201ENST00000635019 2587 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 RNU6-562P-201ENST00000362731 107 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 Y_RNA.159-201ENST00000363674 87 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 MT-TH-201ENST00000387441 69 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 SNORD70.1-201ENST00000391007 85 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 MIR936-201ENST00000401264 98 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.18□□□□□ -2.22
BRCA1P38398 AC004941.2-201ENST00000427009 228 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 ART2BP-201ENST00000453501 499 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 AC008628.2-201ENST00000502605 298 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.18□□□□□ -2.22
BRCA1P38398 MTCO2P4-201ENST00000517968 247 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 PRR13P7-201ENST00000605538 430 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
BRCA1P38398 AC063943.3-201ENST00000615562 356 ntBASIC1.18□□□□□ -2.22
BRCA1P38398 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
BRCA1P38398 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
BRCA1P38398 RNU2-29P-201ENST00000410423 189 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 RNU4-46P-201ENST00000410818 138 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 RNU2-41P-201ENST00000410991 178 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 RPL21P111-201ENST00000418453 477 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 CYCSP46-201ENST00000423569 204 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 MTND2P4-201ENST00000445034 1004 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 AC130509.1-201ENST00000464158 433 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.17□□□□□ -2.22
BRCA1P38398 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.17□□□□□ -2.22
BRCA1P38398 EIF4A1P12-201ENST00000551910 141 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 AC006566.1-201ENST00000608943 513 ntBASIC1.17□□□□□ -2.22
BRCA1P38398 RNA5SP62-201ENST00000363457 110 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 RNU6-112P-201ENST00000363599 104 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.16□□□□□ -2.22
BRCA1P38398 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
BRCA1P38398 AC022364.2-201ENST00000457963 554 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 SCARNA18-201ENST00000459004 134 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 RNU6-1037P-201ENST00000459571 107 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 RAP1BP2-201ENST00000478270 544 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 RNA5SP330-201ENST00000517096 96 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.16□□□□□ -2.22
BRCA1P38398 AL034555.1-201ENST00000604816 211 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 TCL6_2.1-201ENST00000615162 119 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 RNU6-82P-201ENST00000363970 107 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 MIR193B-201ENST00000384907 83 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 AC069257.2-201ENST00000441819 155 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 AC096745.1-201ENST00000509945 370 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.16□□□□□ -2.22
BRCA1P38398 AC073539.2-201ENST00000597113 165 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 AL590095.2-201ENST00000604136 117 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 FAM71BP1-201ENST00000604431 523 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 AL603839.4-201ENST00000624658 1005 ntBASIC1.16□□□□□ -2.22
BRCA1P38398 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
BRCA1P38398 SNORD32A-201ENST00000364805 84 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
BRCA1P38398 RNU6-1103P-201ENST00000384150 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms