Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-864P-201ENST00000516256 108 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXD13P35453 AP000889.1-201ENST00000530968 660 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 AC026470.2-201ENST00000561492 181 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 MIR4435-1-201ENST00000582552 80 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXD13P35453 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXD13P35453 U6atac.1-201ENST00000616025 117 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 U1.36-201ENST00000620684 176 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXD13P35453 AC006504.8-201ENST00000621046 635 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HOXD13P35453 MIR219B-201ENST00000637023 88 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXD13P35453 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HOXD13P35453 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD13P35453 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD13P35453 SNORA32.2-201ENST00000384049 122 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 RNU6-301P-201ENST00000384277 107 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 RNU6-510P-201ENST00000391239 108 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD13P35453 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXD13P35453 DPH3P2-201ENST00000422618 250 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 MTND2P29-201ENST00000438595 412 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD13P35453 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXD13P35453 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXD13P35453 MTND1P11-201ENST00000456661 876 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 snoU13.6-201ENST00000458785 104 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 MTCO2P30-201ENST00000503662 364 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 AP002770.2-201ENST00000543613 532 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 AC124303.1-201ENST00000605703 360 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 AC007014.2-201ENST00000615581 479 ntBASIC2.23□□□□□ -2.05
HOXD13P35453 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXD13P35453 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
HOXD13P35453 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXD13P35453 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXD13P35453 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 RNU6-23P-201ENST00000363283 107 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 MIR517A-201ENST00000385001 87 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 AC123900.1-201ENST00000420390 96 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 BX510359.4-201ENST00000423750 193 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 AL590632.1-201ENST00000424289 371 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXD13P35453 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXD13P35453 AP005660.1-201ENST00000522972 293 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXD13P35453 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXD13P35453 MRPS36P4-201ENST00000534436 298 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXD13P35453 ANP32BP3-201ENST00000559213 706 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 SNORA59B-202ENST00000578183 701 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXD13P35453 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXD13P35453 RMST_6.1-201ENST00000611980 203 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
HOXD13P35453 SDR42E1P4-201ENST00000620894 481 ntBASIC2.22□□□□□ -2.05
HOXD13P35453 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXD13P35453 ZNF702P-202ENST00000434269 1966 ntBASIC2.21□□□□□ -2.05
HOXD13P35453 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 RNU1-76P-201ENST00000362903 159 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 RNU6-1164P-201ENST00000364428 107 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 SNORD31B-201ENST00000364977 69 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 AL139396.1-201ENST00000421137 167 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 Z82205.1-201ENST00000428456 297 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 OR2AQ1P-201ENST00000451972 200 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXD13P35453 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 RNU6-273P-201ENST00000516937 96 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 AF235103.2-201ENST00000525753 346 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 MIR4513-201ENST00000581077 86 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 AC018638.8-201ENST00000588755 281 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 7SK.7-201ENST00000603504 247 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 AC005034.5-201ENST00000604219 466 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 AC122108.2-201ENST00000611946 526 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 LINC02555-201ENST00000563933 1951 ntBASIC2.21□□□□□ -2.06
HOXD13P35453 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
HOXD13P35453 RNU6-831P-201ENST00000384548 107 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 AL158823.1-201ENST00000418441 478 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 EIF4EP2-201ENST00000422816 654 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXD13P35453 HMGN2P3-201ENST00000433603 273 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 HMGN2P5-201ENST00000436882 273 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXD13P35453 RPS29P21-201ENST00000496272 170 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 RNU1-54P-201ENST00000517181 120 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.2□□□□□ -2.06
HOXD13P35453 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 MIR3942-201ENST00000585264 109 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 AC243960.4-201ENST00000600532 288 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 SNRPGP20-201ENST00000604477 205 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 BNIP3P10-201ENST00000605360 577 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms