Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNY3P11-201ENST00000364153 102 ntBASIC2.76□□□□□ -1.97
CIITAP33076 RNU6-639P-201ENST00000384074 107 ntBASIC2.76□□□□□ -1.97
CIITAP33076 MIR544A-201ENST00000384855 91 ntBASIC2.76□□□□□ -1.97
CIITAP33076 BTF3L4P2-201ENST00000392798 346 ntBASIC2.76□□□□□ -1.97
CIITAP33076 MTCO3P29-201ENST00000432119 779 ntBASIC2.76□□□□□ -1.97
CIITAP33076 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.76□□□□□ -1.97
CIITAP33076 Z82188.1-201ENST00000436709 154 ntBASIC2.76□□□□□ -1.97
CIITAP33076 SNORA25.10-201ENST00000515926 124 ntBASIC2.76□□□□□ -1.97
CIITAP33076 RNU6-1046P-201ENST00000516538 107 ntBASIC2.76□□□□□ -1.97
CIITAP33076 RNU5B-3P-201ENST00000516601 115 ntBASIC2.76□□□□□ -1.97
CIITAP33076 AC004486.1-201ENST00000546846 233 ntBASIC2.76□□□□□ -1.97
CIITAP33076 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.76□□□□□ -1.97
CIITAP33076 AC010928.2-201ENST00000588017 287 ntBASIC2.76□□□□□ -1.97
CIITAP33076 AC104695.3-201ENST00000604052 296 ntBASIC2.76□□□□□ -1.97
CIITAP33076 AC103810.6-201ENST00000606708 136 ntBASIC2.76□□□□□ -1.97
CIITAP33076 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.76□□□□□ -1.97
CIITAP33076 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.76□□□□□ -1.97
CIITAP33076 AC069528.2-201ENST00000624849 1991 ntBASIC2.76□□□□□ -1.97
CIITAP33076 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CIITAP33076 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CIITAP33076 RNU6-486P-201ENST00000363116 107 ntBASIC2.75□□□□□ -1.97
CIITAP33076 RNU6-1285P-201ENST00000363480 105 ntBASIC2.75□□□□□ -1.97
CIITAP33076 Y_RNA.145-201ENST00000363527 102 ntBASIC2.75□□□□□ -1.97
CIITAP33076 Y_RNA.364-201ENST00000365532 101 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AL133475.1-201ENST00000404414 305 ntBASIC2.75□□□□□ -1.97
CIITAP33076 RNU2-23P-201ENST00000410545 195 ntBASIC2.75□□□□□ -1.97
CIITAP33076 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 AL358453.1-201ENST00000422522 250 ntBASIC2.75□□□□□ -1.97
CIITAP33076 RPS12P2-201ENST00000439728 269 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AC099799.1-201ENST00000439809 192 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CIITAP33076 AL513124.1-201ENST00000450410 614 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
CIITAP33076 RPL30P10-201ENST00000488148 337 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.75□□□□□ -1.97
CIITAP33076 MIR4765-201ENST00000585007 77 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.75□□□□□ -1.97
CIITAP33076 RNU6-91P-201ENST00000607774 107 ntBASIC2.75□□□□□ -1.97
CIITAP33076 MIR1244-1-201ENST00000612829 85 ntBASIC2.75□□□□□ -1.97
CIITAP33076 MIR1291-201ENST00000627649 87 ntBASIC2.75□□□□□ -1.97
CIITAP33076 MIR1244-3-201ENST00000635744 85 ntBASIC2.75□□□□□ -1.97
CIITAP33076 MIR4272-201ENST00000635924 64 ntBASIC2.75□□□□□ -1.97
CIITAP33076 MIR1244-2-201ENST00000636449 85 ntBASIC2.75□□□□□ -1.97
CIITAP33076 MIR1244-4-202ENST00000636813 85 ntBASIC2.75□□□□□ -1.97
CIITAP33076 AC091812.1-201ENST00000432235 1948 ntBASIC2.75□□□□□ -1.97
CIITAP33076 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CIITAP33076 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CIITAP33076 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CIITAP33076 RNU4-42P-201ENST00000364738 142 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AL139095.1-201ENST00000404326 391 ntBASIC2.74□□□□□ -1.97
CIITAP33076 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CIITAP33076 RNA5SP390-201ENST00000410191 113 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AC096644.2-201ENST00000429278 159 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
CIITAP33076 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.74□□□□□ -1.97
CIITAP33076 AL353752.1-201ENST00000454946 260 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AC080013.2-201ENST00000460866 323 ntBASIC2.74□□□□□ -1.97
CIITAP33076 RPL30P12-201ENST00000474666 353 ntBASIC2.74□□□□□ -1.97
CIITAP33076 RPL23AP75-201ENST00000491601 451 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AF186996.7-201ENST00000492781 209 ntBASIC2.74□□□□□ -1.97
CIITAP33076 SCARNA3-201ENST00000517097 143 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.74□□□□□ -1.97
CIITAP33076 AC008737.2-201ENST00000599446 118 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AL356157.2-201ENST00000605122 111 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AL159153.1-201ENST00000619688 317 ntBASIC2.74□□□□□ -1.97
CIITAP33076 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.74□□□□□ -1.97
CIITAP33076 AL606534.2-204ENST00000635008 178 ntBASIC2.74□□□□□ -1.97
CIITAP33076 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.74□□□□□ -1.97
CIITAP33076 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CIITAP33076 ZNF72P-201ENST00000425869 1908 ntBASIC2.74□□□□□ -1.97
CIITAP33076 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
CIITAP33076 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
CIITAP33076 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CIITAP33076 RNU5B-2P-201ENST00000363036 113 ntBASIC2.73□□□□□ -1.97
CIITAP33076 RNU6-1141P-201ENST00000364520 107 ntBASIC2.73□□□□□ -1.97
CIITAP33076 Y_RNA.314-201ENST00000365114 102 ntBASIC2.73□□□□□ -1.97
CIITAP33076 RNU6-1286P-201ENST00000383871 107 ntBASIC2.73□□□□□ -1.97
CIITAP33076 SNORA12.2-201ENST00000391040 156 ntBASIC2.73□□□□□ -1.97
CIITAP33076 RNU6-985P-201ENST00000410182 104 ntBASIC2.73□□□□□ -1.97
CIITAP33076 AC124916.1-201ENST00000444020 547 ntBASIC2.73□□□□□ -1.97
CIITAP33076 AC234781.5-201ENST00000508429 271 ntBASIC2.73□□□□□ -1.97
CIITAP33076 AC023141.11-201ENST00000508864 202 ntBASIC2.73□□□□□ -1.97
CIITAP33076 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.73□□□□□ -1.97
CIITAP33076 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.73□□□□□ -1.97
CIITAP33076 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.73□□□□□ -1.97
CIITAP33076 AL590705.4-201ENST00000532209 134 ntBASIC2.73□□□□□ -1.97
CIITAP33076 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.73□□□□□ -1.97
CIITAP33076 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.73□□□□□ -1.97
CIITAP33076 AC004584.2-201ENST00000570407 410 ntBASIC2.73□□□□□ -1.97
CIITAP33076 MIR5571-201ENST00000577998 113 ntBASIC2.73□□□□□ -1.97
CIITAP33076 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
CIITAP33076 AC136443.5-201ENST00000603741 370 ntBASIC2.73□□□□□ -1.97
CIITAP33076 AL162730.1-201ENST00000605734 292 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms