Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LIG1P18858 ZNF204P-201ENST00000416749 2397 ntBASIC3.99□□□□□ -1.77
LIG1P18858 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.99□□□□□ -1.77
LIG1P18858 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LIG1P18858 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIG1P18858 Y_RNA.398-201ENST00000383952 99 ntBASIC3.99□□□□□ -1.77
LIG1P18858 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.99□□□□□ -1.77
LIG1P18858 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
LIG1P18858 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.99□□□□□ -1.77
LIG1P18858 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.99□□□□□ -1.77
LIG1P18858 AC006539.3-201ENST00000454258 129 ntBASIC3.99□□□□□ -1.77
LIG1P18858 snoU13.6-201ENST00000458785 104 ntBASIC3.99□□□□□ -1.77
LIG1P18858 AC007215.1-201ENST00000464893 276 ntBASIC3.99□□□□□ -1.77
LIG1P18858 RN7SL594P-201ENST00000470590 287 ntBASIC3.99□□□□□ -1.77
LIG1P18858 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.99□□□□□ -1.77
LIG1P18858 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.99□□□□□ -1.77
LIG1P18858 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LIG1P18858 MIR5692C2-201ENST00000577959 77 ntBASIC3.99□□□□□ -1.77
LIG1P18858 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.99□□□□□ -1.77
LIG1P18858 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.99□□□□□ -1.77
LIG1P18858 AC104465.1-201ENST00000611365 139 ntBASIC3.99□□□□□ -1.77
LIG1P18858 AL138880.2-201ENST00000616214 239 ntBASIC3.99□□□□□ -1.77
LIG1P18858 U4.6-201ENST00000621618 127 ntBASIC3.99□□□□□ -1.77
LIG1P18858 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.99□□□□□ -1.77
LIG1P18858 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIG1P18858 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIG1P18858 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIG1P18858 ADAM3A-203ENST00000461344 2157 ntBASIC3.99□□□□□ -1.77
LIG1P18858 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.99□□□□□ -1.77
LIG1P18858 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.98□□□□□ -1.77
LIG1P18858 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIG1P18858 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
LIG1P18858 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LIG1P18858 AL513302.2-201ENST00000562313 1842 ntBASIC3.98□□□□□ -1.77
LIG1P18858 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIG1P18858 RNU6-1081P-201ENST00000384537 107 ntBASIC3.98□□□□□ -1.77
LIG1P18858 RNA5SP252-201ENST00000391131 119 ntBASIC3.98□□□□□ -1.77
LIG1P18858 ATP5A1P2-201ENST00000412323 255 ntBASIC3.98□□□□□ -1.77
LIG1P18858 AC138623.1-201ENST00000418060 216 ntBASIC3.98□□□□□ -1.77
LIG1P18858 RPL39P29-201ENST00000447779 157 ntBASIC3.98□□□□□ -1.77
LIG1P18858 RN7SL442P-201ENST00000473804 320 ntBASIC3.98□□□□□ -1.77
LIG1P18858 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
LIG1P18858 RNU6-581P-201ENST00000516214 105 ntBASIC3.98□□□□□ -1.77
LIG1P18858 AC018448.1-201ENST00000552843 316 ntBASIC3.98□□□□□ -1.77
LIG1P18858 AC021739.1-201ENST00000559631 174 ntBASIC3.98□□□□□ -1.77
LIG1P18858 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.98□□□□□ -1.77
LIG1P18858 AC055872.1-201ENST00000570978 278 ntBASIC3.98□□□□□ -1.77
LIG1P18858 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LIG1P18858 MTND5P35-201ENST00000557537 1720 ntBASIC3.98□□□□□ -1.77
LIG1P18858 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIG1P18858 Y_RNA.8-201ENST00000362353 102 ntBASIC3.97□□□□□ -1.77
LIG1P18858 SNORA71.3-201ENST00000362582 128 ntBASIC3.97□□□□□ -1.77
LIG1P18858 RNU6-799P-201ENST00000363567 107 ntBASIC3.97□□□□□ -1.77
LIG1P18858 Y_RNA.179-201ENST00000363844 90 ntBASIC3.97□□□□□ -1.77
LIG1P18858 SNORA72.2-201ENST00000365028 127 ntBASIC3.97□□□□□ -1.77
LIG1P18858 RNU6-622P-201ENST00000384272 103 ntBASIC3.97□□□□□ -1.77
LIG1P18858 MIR218-2-201ENST00000385006 110 ntBASIC3.97□□□□□ -1.77
LIG1P18858 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.97□□□□□ -1.77
LIG1P18858 YME1L1P1-201ENST00000429435 297 ntBASIC3.97□□□□□ -1.77
LIG1P18858 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.97□□□□□ -1.77
LIG1P18858 AC009237.7-201ENST00000447357 229 ntBASIC3.97□□□□□ -1.77
LIG1P18858 RNU6-625P-201ENST00000459412 107 ntBASIC3.97□□□□□ -1.77
LIG1P18858 AC106707.2-201ENST00000484182 374 ntBASIC3.97□□□□□ -1.77
LIG1P18858 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.97□□□□□ -1.77
LIG1P18858 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.97□□□□□ -1.77
LIG1P18858 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.97□□□□□ -1.77
LIG1P18858 AC090897.2-201ENST00000581715 130 ntBASIC3.97□□□□□ -1.77
LIG1P18858 AC004832.5-201ENST00000608677 401 ntBASIC3.97□□□□□ -1.77
LIG1P18858 AL365265.1-201ENST00000621045 234 ntBASIC3.97□□□□□ -1.77
LIG1P18858 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.97□□□□□ -1.77
LIG1P18858 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.97□□□□□ -1.77
LIG1P18858 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.96□□□□□ -1.77
LIG1P18858 MAPK10-322ENST00000641485 4530 ntBASIC3.96□□□□□ -1.78
LIG1P18858 RNU6-653P-201ENST00000363074 106 ntBASIC3.96□□□□□ -1.78
LIG1P18858 RNU6-245P-201ENST00000384020 107 ntBASIC3.96□□□□□ -1.78
LIG1P18858 BPY2DP-201ENST00000422208 265 ntBASIC3.96□□□□□ -1.78
LIG1P18858 AC012308.1-201ENST00000451232 178 ntBASIC3.96□□□□□ -1.78
LIG1P18858 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.96□□□□□ -1.78
LIG1P18858 RPL26P9-201ENST00000457466 433 ntBASIC3.96□□□□□ -1.78
LIG1P18858 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.96□□□□□ -1.78
LIG1P18858 RNU6-191P-201ENST00000516295 94 ntBASIC3.96□□□□□ -1.78
LIG1P18858 RNU6-966P-201ENST00000516479 104 ntBASIC3.96□□□□□ -1.78
LIG1P18858 SNORA70.19-201ENST00000516717 90 ntBASIC3.96□□□□□ -1.78
LIG1P18858 AL356575.1-201ENST00000603008 283 ntBASIC3.96□□□□□ -1.78
LIG1P18858 U3.45-201ENST00000607547 219 ntBASIC3.96□□□□□ -1.78
LIG1P18858 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIG1P18858 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LIG1P18858 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LIG1P18858 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIG1P18858 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.95□□□□□ -1.78
LIG1P18858 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.95□□□□□ -1.78
LIG1P18858 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.95□□□□□ -1.78
LIG1P18858 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIG1P18858 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIG1P18858 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.95□□□□□ -1.78
LIG1P18858 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.95□□□□□ -1.78
LIG1P18858 Y_RNA.101-201ENST00000363154 102 ntBASIC3.95□□□□□ -1.78
LIG1P18858 RNU6-211P-201ENST00000384047 107 ntBASIC3.95□□□□□ -1.78
LIG1P18858 Y_RNA.580-201ENST00000391004 95 ntBASIC3.95□□□□□ -1.78
LIG1P18858 BMS1P22-201ENST00000414726 313 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms