Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC092423.1-201ENST00000430165 186 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 RPL23AP22-201ENST00000437556 453 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 Y_RNA.720-201ENST00000517166 92 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 HSPE1P4-201ENST00000550617 308 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AC007375.1-201ENST00000554513 578 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AC136443.5-201ENST00000603741 370 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 uc_338.14-201ENST00000613162 166 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AC137590.2-201ENST00000619709 240 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 AC016717.2-201ENST00000609089 5141 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 RNU6-1010P-201ENST00000362757 107 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 SNORD115-32-201ENST00000364079 82 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR190B-201ENST00000401119 79 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 Y_RNA.605-201ENST00000410577 105 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC004383.1-201ENST00000438135 289 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.63□□□□□ -1.83
RAPGEF3O95398 OSTCP8-201ENST00000445117 448 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MTND5P22-201ENST00000458380 195 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 snoU13.30-201ENST00000458951 104 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 RPL23AP42-201ENST00000471152 471 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 HMGN1P10-201ENST00000474557 553 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 RPL23AP75-201ENST00000491601 451 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC091874.1-201ENST00000511402 339 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 SNORA40.14-201ENST00000516543 86 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC109329.1-201ENST00000518744 317 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC091144.1-201ENST00000519573 138 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR5571-201ENST00000577998 113 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 RPS15AP11-201ENST00000594193 385 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 AC016727.2-201ENST00000603988 621 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 RPL23AP88-201ENST00000605759 454 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR1244-1-201ENST00000612829 85 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR1291-201ENST00000627649 87 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 SNORA43.4-201ENST00000629559 138 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR1244-3-201ENST00000635744 85 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR4272-201ENST00000635924 64 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR1244-2-201ENST00000636449 85 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 MIR1244-4-202ENST00000636813 85 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RAPGEF3O95398 MTND5P27-201ENST00000428871 1720 ntBASIC3.63□□□□□ -1.83
RAPGEF3O95398 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RAPGEF3O95398 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 RNU6-1285P-201ENST00000363480 105 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 RNA5SP456-201ENST00000364002 114 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 SNORA67.3-201ENST00000384366 140 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 AC244670.1-201ENST00000436879 112 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 AC112492.4-201ENST00000456549 352 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 RPS27P26-201ENST00000494583 239 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 RNU6-911P-201ENST00000516523 104 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 Y_RNA.706-201ENST00000516933 99 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 MRPS36P4-201ENST00000534436 298 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 RMST_6.1-201ENST00000611980 203 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 AL162373.1-201ENST00000620433 407 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 MIR6873-201ENST00000622788 63 ntBASIC3.62□□□□□ -1.83
RAPGEF3O95398 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.62□□□□□ -1.83
RAPGEF3O95398 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
RAPGEF3O95398 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RAPGEF3O95398 Y_RNA.405-201ENST00000383979 100 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 Y_RNA.451-201ENST00000384200 100 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 Y_RNA.459-201ENST00000384251 102 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 Y_RNA.524-201ENST00000384564 100 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 Y_RNA.561-201ENST00000384694 100 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 SNORA69.1-201ENST00000390904 137 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 SNORA26.3-201ENST00000391119 136 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 GPM6BP3-201ENST00000442797 145 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.61□□□□□ -1.83
RAPGEF3O95398 RPL30P12-201ENST00000474666 353 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC107222.1-201ENST00000510899 637 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 RNU6-1053P-201ENST00000515930 101 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 RNU6-1137P-201ENST00000517073 99 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC021231.3-201ENST00000558497 370 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.61□□□□□ -1.83
RAPGEF3O95398 VN1R91P-201ENST00000594377 169 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 SNORD58B-201ENST00000607313 66 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC087588.2-201ENST00000617667 426 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC138305.3-201ENST00000624988 240 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 AC093831.2-201ENST00000624393 3427 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 FAM35CP-201ENST00000554755 2470 ntBASIC3.61□□□□□ -1.83
RAPGEF3O95398 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC007336.1-201ENST00000576365 3828 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.6□□□□□ -1.83
RAPGEF3O95398 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.6□□□□□ -1.83
RAPGEF3O95398 RNU5B-2P-201ENST00000363036 113 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 SNORD114-19-201ENST00000363072 75 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 SNORA29-201ENST00000384183 140 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms