Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MIR1294-201ENST00000408503 142 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AL590556.1-201ENST00000423231 483 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 USP9YP28-201ENST00000435142 589 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 MTATP6P13-201ENST00000438531 667 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 RPL9P9-202ENST00000466501 579 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 RNU6-864P-201ENST00000516256 108 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 RNU6-567P-201ENST00000516746 107 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 SNORA31.25-201ENST00000517242 134 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AF235103.2-201ENST00000525753 346 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 HSPE1P4-201ENST00000550617 308 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC007375.1-201ENST00000554513 578 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC021231.3-201ENST00000558497 370 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC018638.8-201ENST00000588755 281 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC011494.1-201ENST00000596454 237 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC146944.4-201ENST00000602697 718 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC078795.3-201ENST00000602913 472 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AL109918.3-201ENST00000603072 338 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AP000907.4-201ENST00000604143 237 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AL136221.1-201ENST00000621449 509 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC009033.1-201ENST00000624279 431 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 AC090517.3-201ENST00000625170 141 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 SNORA43.4-201ENST00000629559 138 ntBASIC1.6□□□□□ -2.15
TRAF3IP2O43734 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAF3IP2O43734 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RNU1-23P-201ENST00000363361 144 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 SNORA25B-201ENST00000365507 128 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RNU6-1032P-201ENST00000384100 107 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RNU6-1013P-201ENST00000384180 107 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AL591034.2-201ENST00000402839 359 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 MTCYBP2-201ENST00000407745 171 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RNA5SP201-201ENST00000410316 124 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RN7SKP158-201ENST00000410453 326 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AL590135.1-201ENST00000422215 156 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC019205.3-201ENST00000424573 156 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 HMGN2P19-201ENST00000425149 265 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC016700.2-201ENST00000446011 156 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AMD1P1-201ENST00000457220 922 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC068781.1-201ENST00000488231 618 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC018868.1-201ENST00000491307 315 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC015911.1-201ENST00000495111 156 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RNU6-358P-201ENST00000516564 75 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 RNU2-19P-201ENST00000517288 84 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC022616.8-201ENST00000533569 253 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 NDUFA5P6-201ENST00000542110 379 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAF3IP2O43734 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AL133215.3-201ENST00000609801 448 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AC068944.2-201ENST00000610373 403 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 MIR8076-201ENST00000611401 83 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 AL450472.1-202ENST00000637286 180 ntBASIC1.59□□□□□ -2.15
TRAF3IP2O43734 MTND4P5-201ENST00000435821 1374 ntBASIC1.59□□□□□ -2.16
TRAF3IP2O43734 snoU2_19.1-201ENST00000362361 80 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNU6-562P-201ENST00000362731 107 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 Y_RNA.72-201ENST00000362894 103 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNU6-1317P-201ENST00000364582 104 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNU6-933P-201ENST00000384424 107 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNU6-1148P-201ENST00000410992 104 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNU6-325P-201ENST00000411132 105 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 DAP3P1-201ENST00000441522 278 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC104564.1-201ENST00000493028 407 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 RNA5SP137-201ENST00000516833 135 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC034114.1-201ENST00000520293 285 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC118273.2-201ENST00000532092 465 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 MIR3672-201ENST00000584290 82 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AL022345.1-201ENST00000607292 135 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC005520.5-201ENST00000613926 164 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC100810.6-201ENST00000638068 285 ntBASIC1.58□□□□□ -2.16
TRAF3IP2O43734 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
TRAF3IP2O43734 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAF3IP2O43734 RNU6-944P-201ENST00000364023 107 ntBASIC1.57□□□□□ -2.16
TRAF3IP2O43734 SNORD32B-201ENST00000364460 84 ntBASIC1.57□□□□□ -2.16
TRAF3IP2O43734 Y_RNA.248-201ENST00000364501 109 ntBASIC1.57□□□□□ -2.16
TRAF3IP2O43734 SNORD116-11-201ENST00000383882 92 ntBASIC1.57□□□□□ -2.16
TRAF3IP2O43734 RNU6-546P-201ENST00000383991 107 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms