Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORA69.1-201ENST00000390904 137 ntBASIC2.55□□□□□ -2
LDB2O43679 RNU6-985P-201ENST00000410182 104 ntBASIC2.55□□□□□ -2
LDB2O43679 Y_RNA.605-201ENST00000410577 105 ntBASIC2.55□□□□□ -2
LDB2O43679 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
LDB2O43679 AC113618.1-201ENST00000416747 285 ntBASIC2.55□□□□□ -2
LDB2O43679 RPL39P40-201ENST00000445481 146 ntBASIC2.55□□□□□ -2
LDB2O43679 CHEK2P4-201ENST00000450340 246 ntBASIC2.55□□□□□ -2
LDB2O43679 AC112492.4-201ENST00000456549 352 ntBASIC2.55□□□□□ -2
LDB2O43679 snoU13.14-201ENST00000459372 104 ntBASIC2.55□□□□□ -2
LDB2O43679 AC087477.1-201ENST00000465747 340 ntBASIC2.55□□□□□ -2
LDB2O43679 RPS27AP9-201ENST00000477681 438 ntBASIC2.55□□□□□ -2
LDB2O43679 SNORA40.14-201ENST00000516543 86 ntBASIC2.55□□□□□ -2
LDB2O43679 HSPE1P20-201ENST00000538133 289 ntBASIC2.55□□□□□ -2
LDB2O43679 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.55□□□□□ -2
LDB2O43679 AC008737.2-201ENST00000599446 118 ntBASIC2.55□□□□□ -2
LDB2O43679 AL162730.1-201ENST00000605734 292 ntBASIC2.55□□□□□ -2
LDB2O43679 RMST_6.1-201ENST00000611980 203 ntBASIC2.55□□□□□ -2
LDB2O43679 AC137590.2-201ENST00000619709 240 ntBASIC2.55□□□□□ -2
LDB2O43679 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
LDB2O43679 AL450472.1-202ENST00000637286 180 ntBASIC2.55□□□□□ -2
LDB2O43679 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LDB2O43679 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LDB2O43679 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
LDB2O43679 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LDB2O43679 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LDB2O43679 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LDB2O43679 RNU6-874P-201ENST00000362390 105 ntBASIC2.54□□□□□ -2
LDB2O43679 RNU4-82P-201ENST00000362443 140 ntBASIC2.54□□□□□ -2
LDB2O43679 RNU6-212P-201ENST00000362642 104 ntBASIC2.54□□□□□ -2
LDB2O43679 RNY3P11-201ENST00000364153 102 ntBASIC2.54□□□□□ -2
LDB2O43679 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
LDB2O43679 Y_RNA.645-201ENST00000391229 102 ntBASIC2.54□□□□□ -2
LDB2O43679 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LDB2O43679 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.54□□□□□ -2
LDB2O43679 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.54□□□□□ -2
LDB2O43679 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.54□□□□□ -2
LDB2O43679 HMGN1P10-201ENST00000474557 553 ntBASIC2.54□□□□□ -2
LDB2O43679 RPL36AP48-201ENST00000485521 314 ntBASIC2.54□□□□□ -2
LDB2O43679 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
LDB2O43679 SRIP1-201ENST00000489235 288 ntBASIC2.54□□□□□ -2
LDB2O43679 AC021146.2-201ENST00000504736 556 ntBASIC2.54□□□□□ -2
LDB2O43679 MRPS36P2-201ENST00000512569 299 ntBASIC2.54□□□□□ -2
LDB2O43679 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
LDB2O43679 Y_RNA.720-201ENST00000517166 92 ntBASIC2.54□□□□□ -2
LDB2O43679 Y_RNA.721-201ENST00000517207 102 ntBASIC2.54□□□□□ -2
LDB2O43679 AC079598.5-201ENST00000547460 117 ntBASIC2.54□□□□□ -2
LDB2O43679 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.54□□□□□ -2
LDB2O43679 HSBP1P1-201ENST00000555205 166 ntBASIC2.54□□□□□ -2
LDB2O43679 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
LDB2O43679 MIR3136-201ENST00000583498 78 ntBASIC2.54□□□□□ -2
LDB2O43679 VN1R91P-201ENST00000594377 169 ntBASIC2.54□□□□□ -2
LDB2O43679 AC136443.5-201ENST00000603741 370 ntBASIC2.54□□□□□ -2
LDB2O43679 AL162373.1-201ENST00000620433 407 ntBASIC2.54□□□□□ -2
LDB2O43679 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.53□□□□□ -2
LDB2O43679 AL359854.1-201ENST00000614203 1594 ntBASIC2.53□□□□□ -2
LDB2O43679 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.53□□□□□ -2
LDB2O43679 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LDB2O43679 AC091812.1-201ENST00000432235 1948 ntBASIC2.53□□□□□ -2
LDB2O43679 Y_RNA.40-201ENST00000362645 93 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-529P-201ENST00000363383 104 ntBASIC2.53□□□□□ -2
LDB2O43679 U3.13-201ENST00000364804 214 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-1083P-201ENST00000384022 107 ntBASIC2.53□□□□□ -2
LDB2O43679 SNORA36A-201ENST00000384221 132 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-17P-201ENST00000384245 107 ntBASIC2.53□□□□□ -2
LDB2O43679 Y_RNA.485-201ENST00000384395 102 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-18P-201ENST00000384527 107 ntBASIC2.53□□□□□ -2
LDB2O43679 MIR153-2-201ENST00000385225 87 ntBASIC2.53□□□□□ -2
LDB2O43679 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
LDB2O43679 Y_RNA.592-201ENST00000410274 109 ntBASIC2.53□□□□□ -2
LDB2O43679 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.53□□□□□ -2
LDB2O43679 AL590135.1-201ENST00000422215 156 ntBASIC2.53□□□□□ -2
LDB2O43679 AC019205.3-201ENST00000424573 156 ntBASIC2.53□□□□□ -2
LDB2O43679 AC096644.2-201ENST00000429278 159 ntBASIC2.53□□□□□ -2
LDB2O43679 AC016700.2-201ENST00000446011 156 ntBASIC2.53□□□□□ -2
LDB2O43679 MTND5P22-201ENST00000458380 195 ntBASIC2.53□□□□□ -2
LDB2O43679 AC112771.1-201ENST00000463581 102 ntBASIC2.53□□□□□ -2
LDB2O43679 TOMM22P6-201ENST00000465035 409 ntBASIC2.53□□□□□ -2
LDB2O43679 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.53□□□□□ -2
LDB2O43679 AIG1P1-201ENST00000503376 148 ntBASIC2.53□□□□□ -2
LDB2O43679 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-764P-201ENST00000516396 105 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-911P-201ENST00000516523 104 ntBASIC2.53□□□□□ -2
LDB2O43679 RNU6-567P-201ENST00000516746 107 ntBASIC2.53□□□□□ -2
LDB2O43679 SNORA31.16-201ENST00000516773 139 ntBASIC2.53□□□□□ -2
LDB2O43679 AC091144.1-201ENST00000519573 138 ntBASIC2.53□□□□□ -2
LDB2O43679 AC006600.1-201ENST00000572529 153 ntBASIC2.53□□□□□ -2
LDB2O43679 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
LDB2O43679 MIR5188-201ENST00000583467 113 ntBASIC2.53□□□□□ -2
LDB2O43679 AC073410.2-201ENST00000603240 332 ntBASIC2.53□□□□□ -2
LDB2O43679 U2.1-201ENST00000618978 145 ntBASIC2.53□□□□□ -2
LDB2O43679 AC243829.7-201ENST00000633081 225 ntBASIC2.53□□□□□ -2
LDB2O43679 SNORD98-201ENST00000636377 67 ntBASIC2.53□□□□□ -2
LDB2O43679 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2.01
LDB2O43679 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2.01
LDB2O43679 AC007336.1-201ENST00000576365 3828 ntBASIC2.52□□□□□ -2.01
LDB2O43679 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LDB2O43679 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
LDB2O43679 Y_RNA.455-201ENST00000384230 98 ntBASIC2.52□□□□□ -2.01
LDB2O43679 RNU1-57P-201ENST00000384491 166 ntBASIC2.52□□□□□ -2.01
LDB2O43679 Y_RNA.527-201ENST00000384573 102 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms