Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SNORD114-6-201ENST00000364393 72 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SLC28A1O00337 RNU6-968P-201ENST00000384076 107 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 SNORA29-201ENST00000384183 140 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 MIR521-1-201ENST00000384902 87 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SLC28A1O00337 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 Y_RNA.615-201ENST00000410769 117 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 RNU1-131P-201ENST00000458943 161 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 HMGN2P26-201ENST00000463169 339 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 TOMM22P6-201ENST00000465035 409 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 RPS23P5-201ENST00000495419 428 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.78□□□□□ -2.12
SLC28A1O00337 AC109635.3-201ENST00000529536 185 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 AC146944.4-201ENST00000602697 718 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC28A1O00337 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC28A1O00337 AC093783.1-201ENST00000612976 329 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 AC245060.5-201ENST00000610778 3293 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC28A1O00337 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SLC28A1O00337 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SLC28A1O00337 Y_RNA.256-201ENST00000364594 104 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 SNORD31B-201ENST00000364977 69 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 Y_RNA.318-201ENST00000365131 97 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 RNU6-1286P-201ENST00000383871 107 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 SNORA48.1-201ENST00000390879 135 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 RNA5SP494-201ENST00000410653 129 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 SNRPEP10-201ENST00000420249 274 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 TRBVA-201ENST00000498804 316 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.77□□□□□ -2.13
SLC28A1O00337 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SLC28A1O00337 ZNF519P2-201ENST00000557032 169 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 MIR4419B-201ENST00000577260 68 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 FGF7P1-201ENST00000582820 288 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 MIR8076-201ENST00000611401 83 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.77□□□□□ -2.13
SLC28A1O00337 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SLC28A1O00337 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SLC28A1O00337 U8.2-201ENST00000363156 134 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 RNU6-1090P-201ENST00000364065 94 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 RNU4-40P-201ENST00000364351 143 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 Y_RNA.530-201ENST00000384587 101 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 AC139712.2-201ENST00000424302 339 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.76□□□□□ -2.13
SLC28A1O00337 AC096745.1-201ENST00000509945 370 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.76□□□□□ -2.13
SLC28A1O00337 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.76□□□□□ -2.13
SLC28A1O00337 CPDP1-201ENST00000579660 283 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 MIR4713-201ENST00000582691 75 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 AC005786.1-201ENST00000588553 154 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 CTHRC1P1-201ENST00000605383 469 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 AC104458.1-201ENST00000608243 463 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 RMST_6.1-201ENST00000611980 203 ntBASIC1.76□□□□□ -2.13
SLC28A1O00337 Y_RNA.9-201ENST00000362354 101 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 RNU5B-2P-201ENST00000363036 113 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 RNU6-1252P-201ENST00000363054 104 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 SNORA18.2-201ENST00000383865 132 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 Y_RNA.402-201ENST00000383972 102 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 RPS26P42-201ENST00000413485 326 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 VN1R36P-201ENST00000414936 291 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 USP9YP28-201ENST00000435142 589 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.75□□□□□ -2.13
SLC28A1O00337 AC016925.1-201ENST00000458303 298 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC130509.1-201ENST00000464158 433 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.75□□□□□ -2.13
SLC28A1O00337 MRPS36P4-201ENST00000534436 298 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC016957.1-201ENST00000534895 309 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 EIF1P4-201ENST00000572664 335 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 MIR4648-201ENST00000580107 72 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.75□□□□□ -2.13
SLC28A1O00337 AL133215.3-201ENST00000609801 448 ntBASIC1.75□□□□□ -2.13
SLC28A1O00337 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.75□□□□□ -2.13
SLC28A1O00337 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SLC28A1O00337 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SLC28A1O00337 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC28A1O00337 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SLC28A1O00337 SNORA12.2-201ENST00000391040 156 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SLC28A1O00337 AL033519.2-201ENST00000403958 392 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 AL589823.1-201ENST00000429577 183 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.74□□□□□ -2.13
SLC28A1O00337 AL645568.3-201ENST00000433683 316 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC28A1O00337 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC28A1O00337 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 RNU6-720P-201ENST00000516363 108 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 MTND1P35-201ENST00000526739 508 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.74□□□□□ -2.13
SLC28A1O00337 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC28A1O00337 AC026470.2-201ENST00000561492 181 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 RMST_3.1-201ENST00000611651 109 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 AC005562.2-201ENST00000618264 111 ntBASIC1.74□□□□□ -2.13
SLC28A1O00337 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms