Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 RNA5SP139-201ENST00000364340 117 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.262-201ENST00000364641 102 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.304-201ENST00000365011 112 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 MIR490-201ENST00000384865 128 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AC009963.1-201ENST00000417265 157 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AL365496.1-201ENST00000426885 215 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AC103975.1-201ENST00000482506 483 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 RNU6-344P-201ENST00000516635 111 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AC022559.1-201ENST00000520905 205 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 EIF4A1P12-201ENST00000551910 141 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AC027176.1-201ENST00000560204 514 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AL360157.1-201ENST00000565962 87 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 MIR8057-201ENST00000620957 69 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK3BL1B0FP48 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.65□□□□□ -1.82
UPK3BL1B0FP48 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.65□□□□□ -1.82
UPK3BL1B0FP48 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
UPK3BL1B0FP48 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.82
UPK3BL1B0FP48 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 SNORA14A-201ENST00000364773 135 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 RNY1P5-201ENST00000383890 115 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 RNU6-187P-201ENST00000384139 106 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 SNORA19-201ENST00000384737 128 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 SNORA40.19-201ENST00000390846 128 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 NDUFB1P1-201ENST00000435191 180 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 AC074198.2-201ENST00000508153 258 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 RNU6-966P-201ENST00000516479 104 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 MIR5692C2-201ENST00000577959 77 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 MIR486-1-201ENST00000612171 68 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 TCL6_2.1-201ENST00000615162 119 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UPK3BL1B0FP48 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 Y_RNA.40-201ENST00000362645 93 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RNU6-655P-201ENST00000362858 107 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RNU6-1210P-201ENST00000363775 107 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 SNORA38.1-201ENST00000364172 131 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RNU1-89P-201ENST00000384592 164 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 MIR549A-201ENST00000385268 96 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RNU6-493P-201ENST00000391321 108 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 AL133475.1-201ENST00000404414 305 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 AC005326.1-201ENST00000429197 123 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RPS3P1-201ENST00000456781 192 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 AL049873.1-201ENST00000480540 376 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RNU6-1278P-201ENST00000516130 107 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 SNORA70.14-201ENST00000516205 110 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RNU6-155P-201ENST00000516347 100 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 MRPS18CP4-201ENST00000535821 231 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 AC006380.1-201ENST00000603598 186 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 MIR8058-201ENST00000615737 89 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 snoU18.1-201ENST00000629629 71 ntBASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK3BL1B0FP48 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 RNU4-15P-201ENST00000362613 141 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 RNU4-80P-201ENST00000363200 141 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 U3.9-201ENST00000363823 204 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 RNU6-1264P-201ENST00000383891 107 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 Y_RNA.500-201ENST00000384466 111 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 RNU1-57P-201ENST00000384491 166 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 HMGN2P8-201ENST00000391458 268 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 OOSP1P1-201ENST00000423265 274 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 AC091179.1-201ENST00000461606 579 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 RPL36AP48-201ENST00000485521 314 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 VWA8P1-201ENST00000510889 176 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms