Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 TPRKBP2-201ENST00000565969 475 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 CYP4A27P-201ENST00000567218 190 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 MIR3973-201ENST00000579824 107 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 AL031775.1-201ENST00000607014 887 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 AL139418.1-201ENST00000613613 177 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 AC104010.1-201ENST00000616889 150 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 AL138960.2-201ENST00000625145 535 ntBASIC0.47□□□□□ -2.33
TRAV1-1A0A0B4J248 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-37P-201ENST00000362692 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-11P-201ENST00000364234 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-25P-201ENST00000383873 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-48P-201ENST00000384161 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-16P-201ENST00000384385 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-809P-201ENST00000384461 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-15P-201ENST00000384534 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-29P-201ENST00000384637 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR200A-201ENST00000384875 90 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-910P-201ENST00000390844 107 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 C1DP2-201ENST00000418167 426 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 AC063976.4-201ENST00000421971 163 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 AC007283.2-201ENST00000424739 197 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 HSFY7P-201ENST00000432672 318 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 SNAP23P1-201ENST00000433229 246 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 HSFY8P-201ENST00000437934 318 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 HSPE1P13-201ENST00000451143 297 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 C1DP4-201ENST00000455429 424 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 AC112206.4-201ENST00000515142 405 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORA31.4-201ENST00000516049 129 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 SUMO2P16-201ENST00000519475 264 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 AP003181.2-201ENST00000528941 181 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 AC021506.2-201ENST00000612354 169 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV1-1A0A0B4J248 AC018630.2-201ENST00000534866 2403 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-562P-201ENST00000362731 107 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 Y_RNA.124-201ENST00000363339 93 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-418P-201ENST00000384035 107 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR613-201ENST00000385248 95 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 USP9YP25-201ENST00000457708 443 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 RPS27P22-201ENST00000478056 241 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 HMGN1P12-201ENST00000499125 195 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 PDCD5P2-201ENST00000507570 312 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORA31.2-201ENST00000516019 134 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORD79.1-201ENST00000516069 84 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AL590705.4-201ENST00000532209 134 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC016957.1-201ENST00000534895 309 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AL121579.1-201ENST00000555129 305 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC091489.2-201ENST00000566263 604 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 TMF1P1-201ENST00000576058 373 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC008751.2-201ENST00000597885 980 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AL513534.2-201ENST00000603836 250 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 Z98751.3-201ENST00000604447 521 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC064807.4-201ENST00000607201 407 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 RMST_2.1-201ENST00000617263 136 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC019226.2-201ENST00000625973 424 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 AC004808.1-201ENST00000627671 721 ntBASIC0.45□□□□□ -2.34
TRAV1-1A0A0B4J248 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-552P-201ENST00000362869 119 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-428P-201ENST00000362942 107 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORA33-201ENST00000363664 130 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-1026P-201ENST00000384465 108 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 Y_RNA.576-201ENST00000384781 102 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR605-201ENST00000385078 83 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR300-201ENST00000401138 83 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 Y_RNA.608-201ENST00000410647 95 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC011233.1-201ENST00000422812 283 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MTATP6P16-201ENST00000434543 526 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC002486.1-201ENST00000435098 391 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MTND4LP16-201ENST00000440828 295 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AL031313.1-201ENST00000448435 256 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 GAPDHP17-201ENST00000449858 1001 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 SNRPGP7-201ENST00000469016 106 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC048334.1-201ENST00000477975 159 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AL163973.1-201ENST00000484753 577 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC008628.2-201ENST00000502605 298 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC016632.1-201ENST00000503994 196 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 LRRC34P2-201ENST00000514850 553 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-567P-201ENST00000516746 107 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 AP003484.1-201ENST00000530974 250 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms