Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-169P-201ENST00000365336 107 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 RNU6-877P-201ENST00000383868 107 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 SNRPEP10-201ENST00000420249 274 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC104850.1-201ENST00000435940 476 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC069257.2-201ENST00000441819 155 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 PGBD4P5-201ENST00000445958 426 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 MTND1P18-201ENST00000448191 573 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 ELOCP32-201ENST00000548625 324 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC090517.1-201ENST00000569307 266 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 MZT1P2-201ENST00000604387 248 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC011155.2-201ENST00000623202 216 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AL133216.2-202ENST00000634512 349 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 AC106754.1-201ENST00000562632 1513 ntBASIC0.93□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.796-201ENST00000364268 102 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.799-201ENST00000364992 102 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 MIR194-1-201ENST00000384892 85 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 SNORA26.3-201ENST00000391119 136 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 COX6CP10-201ENST00000416832 224 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AL354692.1-201ENST00000423044 315 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC073910.1-201ENST00000445047 438 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 RAP1BP2-201ENST00000478270 544 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 RPS23P5-201ENST00000495419 428 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC016632.1-201ENST00000503994 196 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 MTCO3P7-201ENST00000510008 774 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 MTATP6P9-201ENST00000515039 680 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 RNU6-311P-201ENST00000516224 102 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 RN7SKP88-201ENST00000516847 250 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 CENPUP1-201ENST00000526649 1202 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC008751.2-201ENST00000597885 980 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 Z98751.3-201ENST00000604447 521 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC080078.3-201ENST00000605407 463 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 7SK.8-201ENST00000612110 250 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 7SK.11-201ENST00000615477 250 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 AC126177.8-201ENST00000618339 1015 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 7SK.13-201ENST00000622040 250 ntBASIC0.92□□□□□ -2.26
USH1CQ9Y6N9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 OR4G1P-203ENST00000641984 1631 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 SNORD114-22-201ENST00000365423 72 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 Y_RNA.504-201ENST00000384481 104 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 RPL21P1-201ENST00000399532 476 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AL133396.1-201ENST00000432048 687 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 SNAP23P1-201ENST00000433229 246 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 GTF2IP13-201ENST00000438487 386 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AL031274.1-201ENST00000450334 232 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AL133217.1-201ENST00000450980 425 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC013470.1-201ENST00000453438 462 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 ZNF114P1-201ENST00000453500 292 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AL162395.1-201ENST00000457882 422 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC007547.1-201ENST00000462177 490 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 RPS26P45-201ENST00000471748 340 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 NIFKP6-201ENST00000598115 845 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 VN1R107P-201ENST00000601784 209 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AL078603.1-201ENST00000603824 313 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AL356157.2-201ENST00000605122 111 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC091304.9-201ENST00000612091 226 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC008147.4-201ENST00000617570 1204 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 AC022306.3-201ENST00000619930 550 ntBASIC0.91□□□□□ -2.26
USH1CQ9Y6N9 RNU1-76P-201ENST00000362903 159 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 Y_RNA.367-201ENST00000365544 101 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 MIR208B-201ENST00000401172 77 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 RPS29P13-201ENST00000402041 169 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AL117342.1-201ENST00000404861 406 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 RPL23AP95-201ENST00000426806 265 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC002486.1-201ENST00000435098 391 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC073614.1-201ENST00000438690 650 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 EPS15P1-201ENST00000448836 336 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 HSPE1P13-201ENST00000451143 297 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC114982.1-201ENST00000469402 321 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms