Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.380-201ENST00000365663 111 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.405-201ENST00000383979 100 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.451-201ENST00000384200 100 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.524-201ENST00000384564 100 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.561-201ENST00000384694 100 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 MIR196B-201ENST00000384852 84 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-750P-201ENST00000390946 107 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-823P-201ENST00000391042 103 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AL353705.4-201ENST00000449661 238 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 CHEK2P4-201ENST00000450340 246 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 snoU13.30-201ENST00000458951 104 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 SNORD109B-201ENST00000458961 67 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 SNORD109A-201ENST00000459128 67 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AC016632.1-201ENST00000503994 196 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.706-201ENST00000516933 99 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AC006600.1-201ENST00000572529 153 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AC090897.2-201ENST00000581715 130 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 RPL23AP78-201ENST00000599928 470 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 Z98751.3-201ENST00000604447 521 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-91P-201ENST00000607774 107 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 U2.1-201ENST00000618978 145 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 SCARNA4-201ENST00000629045 128 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AC243829.7-201ENST00000633081 225 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-622P-201ENST00000384272 103 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 RN7SKP61-201ENST00000410642 295 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 AL358453.1-201ENST00000422522 250 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 AC078809.1-201ENST00000427601 140 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 RNU7-169P-201ENST00000459456 61 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 RPL23AP75-201ENST00000491601 451 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 MRPS36P4-201ENST00000534436 298 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 AC007375.1-201ENST00000554513 578 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 MIR4435-1-201ENST00000582552 80 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 AC124312.5-201ENST00000604451 268 ntBASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX2IPQ9Y2D8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC099654.7-201ENST00000635788 2127 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-859P-201ENST00000362728 107 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 RNU1-105P-201ENST00000363470 161 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.152-201ENST00000363578 100 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 RNY3P11-201ENST00000364153 102 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-463P-201ENST00000384340 107 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.557-201ENST00000384680 107 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 MIR628-201ENST00000385229 95 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 MIR548F4-201ENST00000408515 105 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.592-201ENST00000410274 109 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AL365496.1-201ENST00000426885 215 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 MTCO3P29-201ENST00000432119 779 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 RPL39P29-201ENST00000447779 157 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC091874.1-201ENST00000511402 339 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC040926.1-201ENST00000530195 238 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC079600.2-201ENST00000550076 130 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 HSPE1P4-201ENST00000550617 308 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AL355877.2-201ENST00000603670 358 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC096772.1-201ENST00000609146 564 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 RMST_6.1-201ENST00000611980 203 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC007792.1-201ENST00000623023 402 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC002543.1-201ENST00000299783 1954 ntBASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX2IPQ9Y2D8 AC092268.1-201ENST00000342691 405 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.149-201ENST00000363558 117 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 SNORD115-32-201ENST00000364079 82 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 SNORA63.7-201ENST00000365579 123 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 SNORA29-201ENST00000384183 140 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.504-201ENST00000384481 104 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 MIR181B1-201ENST00000385240 110 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 MIR147B-201ENST00000390185 80 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AL590004.2-201ENST00000404787 371 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 MIR1252-201ENST00000408861 65 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 HMGB3P2-201ENST00000411913 584 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC114482.1-201ENST00000418010 247 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 DPH3P2-201ENST00000422618 250 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC009296.1-201ENST00000443146 155 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC108938.1-201ENST00000451204 136 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 OR2AQ1P-201ENST00000451972 200 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 MTCO3P8-201ENST00000453691 755 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 RPL22P13-201ENST00000493291 347 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-826P-201ENST00000516827 104 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms