Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.59□□□□□ -1.83
SHROOM4Q9ULL8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHROOM4Q9ULL8 Y_RNA.167-201ENST00000363735 109 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.615-201ENST00000410769 117 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 MRPS10P2-201ENST00000431226 381 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 RNU7-95P-201ENST00000459222 64 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 HMGB3P3-201ENST00000510526 400 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 SNORD14A-201ENST00000606526 91 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 AC090517.2-201ENST00000614966 680 ntBASIC3.59□□□□□ -1.84
SHROOM4Q9ULL8 MIRLET7G-201ENST00000362280 84 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-451P-201ENST00000362921 107 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-522P-201ENST00000364497 107 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 RPL23AP95-201ENST00000426806 265 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 AC104576.1-201ENST00000524225 88 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 AC009127.3-201ENST00000570531 403 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 SNRPGP17-201ENST00000603780 214 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 AL034555.1-201ENST00000604816 211 ntBASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SHROOM4Q9ULL8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.100-201ENST00000363141 102 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 SNORA3A-201ENST00000364113 130 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.256-201ENST00000364594 104 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-128P-201ENST00000383976 107 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 SNORA40.19-201ENST00000390846 128 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 ZNF885P-201ENST00000420174 1098 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AMD1P1-201ENST00000457220 922 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AC007547.1-201ENST00000462177 490 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 TRBVA-201ENST00000498804 316 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 SNORA4.4-201ENST00000515921 135 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AC018630.3-201ENST00000542637 96 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AC027514.1-201ENST00000588561 1603 ntBASIC3.57□□□□□ -1.84
SHROOM4Q9ULL8 AC009541.1-201ENST00000438279 2662 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-611P-201ENST00000384276 104 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.530-201ENST00000384587 101 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 MIR1294-201ENST00000408503 142 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 GPM6BP3-201ENST00000442797 145 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 AC025465.4-201ENST00000513422 638 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-567P-201ENST00000516746 107 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-612P-201ENST00000516909 102 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 AC034114.1-201ENST00000520293 285 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 MIR203B-201ENST00000636080 86 ntBASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.56□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-227P-201ENST00000362865 103 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.89-201ENST00000363031 102 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-944P-201ENST00000364023 107 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.504-201ENST00000384481 104 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-717P-201ENST00000459076 104 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 AC018868.1-201ENST00000491307 315 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 SNORA25.15-201ENST00000516487 89 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 RNA5SP480-201ENST00000516840 109 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 IGLV3-17-201ENST00000519099 244 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 TRAV32-201ENST00000553993 340 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 AC021231.3-201ENST00000558497 370 ntBASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.224-201ENST00000364308 111 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 Y_RNA.295-201ENST00000364918 102 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-192P-201ENST00000391253 100 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 RNA5SP118-201ENST00000410385 109 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 FCF1P9-201ENST00000412546 282 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 AC107393.1-201ENST00000512403 346 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 SNORA31.15-201ENST00000516771 132 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 RNA5SP137-201ENST00000516833 135 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 RNU6-667P-201ENST00000517186 102 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 SCOCP1-201ENST00000554676 349 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 MIR6504-201ENST00000613520 61 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 MTND4P23-201ENST00000447723 1363 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 RNU4-15P-201ENST00000362613 141 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 EIF1AXP1-201ENST00000419267 435 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 AL645568.3-201ENST00000433683 316 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 IFNA20P-201ENST00000436840 528 ntBASIC3.54□□□□□ -1.84
SHROOM4Q9ULL8 AL137159.1-201ENST00000452808 512 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms