Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 RNU4-24P-201ENST00000364565 139 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.504-201ENST00000384481 104 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 SNORA12-201ENST00000391162 147 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 RNU6-648P-201ENST00000410190 107 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AP000275.1-201ENST00000411943 390 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 MTCO3P41-201ENST00000414801 328 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 ARL5AP1-201ENST00000418991 388 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AL139415.2-201ENST00000431968 163 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AL133396.1-201ENST00000432048 687 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 MTND1P1-201ENST00000445453 368 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 RNU6-1037P-201ENST00000459571 107 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AC087477.1-201ENST00000465747 340 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 SNORA19.2-201ENST00000516013 114 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 RNU6-1069P-201ENST00000516612 133 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 RNU6-567P-201ENST00000516746 107 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AC027807.1-201ENST00000559921 996 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AC080013.6-201ENST00000606185 215 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AL357078.3-201ENST00000607528 618 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AC092807.2-201ENST00000609367 243 ntBASIC1.58□□□□□ -2.16
SMPD3Q9NY59 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.58□□□□□ -2.16
SMPD3Q9NY59 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SNORD114-6-201ENST00000364393 72 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SNORA70B-201ENST00000384210 135 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SNORA26.3-201ENST00000391119 136 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AL079342.1-201ENST00000401460 267 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC019129.1-201ENST00000403786 261 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 RN7SKP223-201ENST00000410582 62 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SEPT14P3-201ENST00000439401 183 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 MTCO1P44-201ENST00000441935 243 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AL732372.2-207ENST00000445840 183 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.57□□□□□ -2.16
SMPD3Q9NY59 MTND3P16-201ENST00000452205 344 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SEPT14P2-201ENST00000453405 183 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 RNU6-1208P-201ENST00000459588 107 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC130509.1-201ENST00000464158 433 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 TRBV12-1-201ENST00000479785 344 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 RPS29P11-201ENST00000496507 171 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC105313.1-201ENST00000509121 353 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC091874.1-201ENST00000511402 339 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SEPT14P4-201ENST00000513445 186 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.57□□□□□ -2.16
SMPD3Q9NY59 MIR449C-201ENST00000516047 92 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SNORD60.2-201ENST00000516883 86 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 FO082796.1-201ENST00000523795 183 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AP005597.4-201ENST00000526762 229 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC025423.5-201ENST00000550230 219 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 MIR4648-201ENST00000580107 72 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC078795.3-201ENST00000602913 472 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AC068944.2-201ENST00000610373 403 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 AL121757.2-201ENST00000611223 313 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.57□□□□□ -2.16
SMPD3Q9NY59 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 U3.9-201ENST00000363823 204 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 RNU6-438P-201ENST00000365561 103 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.517-201ENST00000384551 106 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 SNORA3.2-201ENST00000408221 125 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 RNA5SP201-201ENST00000410316 124 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC019235.1-201ENST00000503847 207 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 RPL39P5-202ENST00000512505 151 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC104576.1-201ENST00000524225 88 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC245505.1-201ENST00000556398 224 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC021231.3-201ENST00000558497 370 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 MIR5692C1-201ENST00000585309 91 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 MTND5P9-201ENST00000503854 1755 ntBASIC1.56□□□□□ -2.16
SMPD3Q9NY59 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
SMPD3Q9NY59 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.67-201ENST00000362870 100 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.231-201ENST00000364358 102 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 RNU4-75P-201ENST00000364621 146 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 MIR514A2-201ENST00000385131 88 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 MIR514A3-201ENST00000385132 88 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 RNU6-780P-201ENST00000391030 104 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms