Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU6-764P-201ENST00000516396 105 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 RN7SKP40-201ENST00000517211 242 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 HSPE1P18-201ENST00000517602 280 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC026403.1-201ENST00000518938 295 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC040926.1-201ENST00000530195 238 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 MIR5695-201ENST00000579717 85 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC090616.3-201ENST00000582184 217 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC023043.3-201ENST00000593113 385 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC005034.5-201ENST00000604219 466 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC018692.3-201ENST00000623929 123 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC012442.3-202ENST00000636742 206 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.27-201ENST00000362540 103 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 RNU6-873P-201ENST00000363833 107 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 RNU6-280P-201ENST00000364145 104 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.455-201ENST00000384230 98 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 SNORA7.4-201ENST00000384249 137 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.526-201ENST00000384572 110 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 snosnR66.1-201ENST00000391095 99 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 PTMAP2-201ENST00000397627 327 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 RNU6-101P-201ENST00000410323 104 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC112220.1-201ENST00000434628 355 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC022616.4-201ENST00000522985 181 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC026470.2-201ENST00000561492 181 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC090517.1-201ENST00000569307 266 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 SNRPGP20-201ENST00000604477 205 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AC008121.3-201ENST00000618726 433 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 AL034408.1-202ENST00000636088 415 ntBASIC3.05□□□□□ -1.92
MKS1Q9NXB0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.05□□□□□ -1.92
MKS1Q9NXB0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNU6-1301P-201ENST00000362724 104 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNU6-879P-201ENST00000364328 108 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNU6-450P-201ENST00000364654 107 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNU6-245P-201ENST00000384020 107 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNU6-708P-201ENST00000384217 107 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RNY3P4-201ENST00000384428 101 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 MIR320B2-201ENST00000408479 138 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AL451074.5-201ENST00000415894 435 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC027124.2-201ENST00000428249 105 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RPS3AP12-201ENST00000443616 753 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 MTCO3P8-201ENST00000453691 755 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 CYP2C59P-201ENST00000457790 269 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 snoU13.22-201ENST00000459428 104 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC110794.1-201ENST00000505816 425 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.720-201ENST00000517166 92 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC125232.2-201ENST00000592457 143 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC008737.2-201ENST00000599446 118 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RPS29P30-201ENST00000600975 111 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 RPL12P50-201ENST00000603116 116 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC124312.5-201ENST00000604451 268 ntBASIC3.04□□□□□ -1.92
MKS1Q9NXB0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
MKS1Q9NXB0 AC135776.4-201ENST00000624300 1904 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MKS1Q9NXB0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MKS1Q9NXB0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 RNU6-944P-201ENST00000364023 107 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 SNORA51.11-201ENST00000384442 131 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 MIR200C-201ENST00000384980 68 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 MIR95-201ENST00000385072 81 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 CBX3P6-201ENST00000430257 527 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 AL161788.1-201ENST00000441805 169 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 RPL39P40-201ENST00000445481 146 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 SNORA84-201ENST00000459229 133 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 RNA5SP76-201ENST00000516277 87 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 SNORA25.14-201ENST00000516481 132 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 AC093023.1-201ENST00000547375 507 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 AC113195.1-201ENST00000579952 141 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 AC006133.1-201ENST00000617106 264 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 AC005562.2-201ENST00000618264 111 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 FO624990.1-201ENST00000636373 85 ntBASIC3.03□□□□□ -1.92
MKS1Q9NXB0 MIR622-201ENST00000638396 96 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms