Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.708-201ENST00000516950 96 ntBASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 MIR5195-201ENST00000583555 115 ntBASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 AC093732.2-201ENST00000607950 274 ntBASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 AC096577.2-201ENST00000611455 153 ntBASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 AC098657.3-201ENST00000620434 263 ntBASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
CHMP1AQ9HD42 KPNA2P1-201ENST00000458289 1591 ntBASIC2.15□□□□□ -2.06
CHMP1AQ9HD42 ZNF299P-201ENST00000406845 1804 ntBASIC2.15□□□□□ -2.06
CHMP1AQ9HD42 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 RNU6-595P-201ENST00000363944 107 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 SNORA9-201ENST00000384215 133 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 RNA5SP171-201ENST00000391071 115 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 NCOR1P3-201ENST00000420479 303 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AL135938.1-201ENST00000443141 297 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 MTND5P20-201ENST00000448677 143 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 HMGN2P18-201ENST00000450680 270 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AL137159.1-201ENST00000452808 512 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC007215.1-201ENST00000464893 276 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 RPL30P10-201ENST00000488148 337 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC093259.1-201ENST00000509755 300 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC108043.1-201ENST00000512696 574 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC096725.1-201ENST00000514266 313 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 RNA5SP384-201ENST00000516615 116 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 RNU6-1213P-201ENST00000517075 94 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC007179.3-201ENST00000604976 235 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHMP1AQ9HD42 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.2-201ENST00000362330 96 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 RNU1-76P-201ENST00000362903 159 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 SNORD115-32-201ENST00000364079 82 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 SNORA18.2-201ENST00000383865 132 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 MIR32-201ENST00000384965 70 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AL356057.3-201ENST00000402607 340 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AC027124.2-201ENST00000428249 105 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AL035666.1-201ENST00000446195 348 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 snoU13.30-201ENST00000458951 104 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.635-201ENST00000459041 101 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 RNU6-277P-201ENST00000516272 106 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AC005014.2-201ENST00000607795 599 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AC104260.1-201ENST00000616660 539 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AL137790.1-201ENST00000634283 177 ntBASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHMP1AQ9HD42 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 SNORD46.1-201ENST00000364139 104 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 SNORA44-201ENST00000384584 132 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 RNU6-331P-201ENST00000384724 107 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 MIR9-1-201ENST00000385198 89 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 SNORA75.4-201ENST00000391278 119 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AL355497.1-201ENST00000406262 551 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 RNU6-370P-201ENST00000411008 104 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 RNA5SP270-201ENST00000411361 118 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AC092473.1-201ENST00000441098 221 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AL513328.1-201ENST00000446460 224 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 TOMM22P6-201ENST00000465035 409 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.702-201ENST00000516843 96 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 SNORA31.25-201ENST00000517242 134 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AC026271.5-201ENST00000577873 130 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AL132765.2-201ENST00000610812 351 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 MIR6798-201ENST00000612887 67 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AL359314.1-201ENST00000616913 261 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 AC137590.2-201ENST00000619709 240 ntBASIC2.13□□□□□ -2.07
CHMP1AQ9HD42 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms