Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RPS3AP37-201ENST00000419176 745 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.57□□□□□ -2.32
TRIM4Q9C037 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.57□□□□□ -2.32
TRIM4Q9C037 AL360271.2-201ENST00000447710 161 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC090142.3-201ENST00000519012 385 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC008751.2-201ENST00000597885 980 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC012507.3-201ENST00000603556 477 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC084824.5-201ENST00000612009 413 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC103706.2-201ENST00000638080 240 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRIM4Q9C037 Y_RNA.124-201ENST00000363339 93 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 RNY4P16-201ENST00000364768 94 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AL136310.1-201ENST00000404926 654 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 MTCYBP2-201ENST00000407745 171 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC063976.4-201ENST00000421971 163 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.56□□□□□ -2.32
TRIM4Q9C037 GTF2IP13-201ENST00000438487 386 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC016925.1-201ENST00000458303 298 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 RNU7-14P-201ENST00000459331 62 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.56□□□□□ -2.32
TRIM4Q9C037 SNORA31.2-201ENST00000516019 134 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC087883.1-201ENST00000551882 391 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.56□□□□□ -2.32
TRIM4Q9C037 AC021231.3-201ENST00000558497 370 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 MIR3136-201ENST00000583498 78 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 HMGN1P30-201ENST00000589286 268 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AL627230.5-201ENST00000619807 58 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 AL445523.1-201ENST00000451184 1362 ntBASIC0.56□□□□□ -2.32
TRIM4Q9C037 RNU6-1123P-201ENST00000362347 106 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 RNU4-79P-201ENST00000362764 141 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 RNU6-433P-201ENST00000363216 104 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 RPS26P5-201ENST00000418544 335 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.55□□□□□ -2.32
TRIM4Q9C037 RAB28P5-201ENST00000427490 651 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC002429.1-201ENST00000437672 148 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 RNU7-34P-201ENST00000459394 64 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AL049829.1-201ENST00000465411 156 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 TRBVA-201ENST00000498804 316 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 RNU6-1098P-201ENST00000516772 96 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 SUMO2P16-201ENST00000519475 264 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 ADI1P3-201ENST00000549509 470 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.55□□□□□ -2.32
TRIM4Q9C037 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.55□□□□□ -2.32
TRIM4Q9C037 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC022432.1-201ENST00000595739 310 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC012409.4-201ENST00000612923 249 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 AC008147.4-201ENST00000617570 1204 ntBASIC0.55□□□□□ -2.32
TRIM4Q9C037 Y_RNA.167-201ENST00000363735 109 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 Y_RNA.303-201ENST00000364998 94 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 SNORD116-12-201ENST00000384468 92 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.54□□□□□ -2.32
TRIM4Q9C037 RPS3AP1-201ENST00000413190 320 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.54□□□□□ -2.32
TRIM4Q9C037 MTND5P2-201ENST00000442927 1142 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.54□□□□□ -2.32
TRIM4Q9C037 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.54□□□□□ -2.32
TRIM4Q9C037 RPS27P22-201ENST00000478056 241 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 RAP1BP2-201ENST00000478270 544 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.54□□□□□ -2.32
TRIM4Q9C037 AC010587.2-201ENST00000511727 448 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 SNORA31.4-201ENST00000516049 129 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 RNU6-123P-201ENST00000516163 102 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 AC107934.1-201ENST00000522215 217 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 ZNF321P-202ENST00000550843 495 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 BNIP3P16-201ENST00000589779 534 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.54□□□□□ -2.32
TRIM4Q9C037 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 AP000943.4-201ENST00000622912 357 ntBASIC0.54□□□□□ -2.32
TRIM4Q9C037 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AC006366.1-201ENST00000422002 759 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.53□□□□□ -2.32
TRIM4Q9C037 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.53□□□□□ -2.32
TRIM4Q9C037 RPL39P38-201ENST00000467018 153 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AC048334.1-201ENST00000477975 159 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AC011979.2-201ENST00000527568 352 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AL590705.4-201ENST00000532209 134 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.53□□□□□ -2.32
TRIM4Q9C037 AL121579.1-201ENST00000555129 305 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 MIR4742-201ENST00000581069 85 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 AC008752.3-201ENST00000588113 712 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 CTHRC1P1-201ENST00000605383 469 ntBASIC0.53□□□□□ -2.32
TRIM4Q9C037 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.53□□□□□ -2.32
TRIM4Q9C037 RNA5SP361-201ENST00000362686 118 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TRIM4Q9C037 Y_RNA.518-201ENST00000384552 113 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 RNA5SP63-201ENST00000391225 112 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 RNA5SP201-201ENST00000410316 124 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.52□□□□□ -2.33
TRIM4Q9C037 Z99497.1-201ENST00000421282 135 ntBASIC0.52□□□□□ -2.33
TRIM4Q9C037 AL590135.1-201ENST00000422215 156 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms