Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-833P-201ENST00000363486 107 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 SNORD116-20-201ENST00000384529 92 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AL355796.1-201ENST00000406706 323 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 HMGN2P34-201ENST00000437647 269 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AC012414.2-201ENST00000559474 187 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AL158211.1-201ENST00000566763 763 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AC008147.4-201ENST00000617570 1204 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 AC104985.3-201ENST00000623479 597 ntBASIC-0.22□□□□□ -2.45
SCAPERQ9BY12 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 RNA5SP214-201ENST00000363378 118 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 SNORD95.1-201ENST00000364099 68 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 RNY1P8-201ENST00000383970 114 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 RNU6-549P-201ENST00000384433 107 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 RNA5SP504-201ENST00000410676 117 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 DPRXP1-201ENST00000426312 460 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 RPL23AP50-201ENST00000434149 455 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 MTND4P25-201ENST00000441039 533 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 RPL39P39-201ENST00000455840 151 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 SNORA70.12-201ENST00000516084 153 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 AC080078.2-201ENST00000603766 501 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 SNRPGP20-201ENST00000604477 205 ntBASIC-0.23□□□□□ -2.45
SCAPERQ9BY12 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 SNORA12.2-201ENST00000391040 156 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 RNU6-932P-201ENST00000391108 106 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 RNU6-952P-201ENST00000391164 108 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 AL034345.1-201ENST00000407768 123 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 MIR4290-201ENST00000583807 95 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 AL357312.1-201ENST00000603879 298 ntBASIC-0.24□□□□□ -2.45
SCAPERQ9BY12 SNORA42.1-201ENST00000363515 137 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 SNORA32.2-201ENST00000384049 122 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 RNU6-505P-201ENST00000384427 107 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 SNORA12-201ENST00000391162 147 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 RNU6-177P-201ENST00000411257 104 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AC093534.1-201ENST00000504977 132 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 TPRKBP2-201ENST00000565969 475 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AL136363.2-201ENST00000604173 851 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AC018889.1-201ENST00000605372 397 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AL136317.1-201ENST00000612653 226 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AC090517.2-201ENST00000614966 680 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 AL157786.1-207ENST00000627771 695 ntBASIC-0.25□□□□□ -2.45
SCAPERQ9BY12 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 SNORA72.2-201ENST00000365028 127 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 RNU6-30P-201ENST00000384561 107 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 MIR653-201ENST00000385279 96 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 MTCO3P43-201ENST00000440974 771 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AL122001.1-201ENST00000457027 370 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AP000797.1-201ENST00000478870 387 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AC069113.3-201ENST00000521019 150 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 SUB1P2-201ENST00000556401 297 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AL133153.1-201ENST00000557756 303 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AC022523.2-201ENST00000561045 150 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AL929325.1-201ENST00000603096 117 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 RNU4-5P-201ENST00000607255 135 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 uc_338.34-201ENST00000617467 174 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AC136475.10-201ENST00000620253 385 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AL078595.3-201ENST00000623815 1166 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 AC120349.2-201ENST00000625002 298 ntBASIC-0.26□□□□□ -2.45
SCAPERQ9BY12 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AC060773.1-201ENST00000421698 310 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AL365338.1-201ENST00000422282 858 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AL121578.1-201ENST00000428051 892 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AC016717.1-201ENST00000448918 286 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AC093027.1-201ENST00000546698 429 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 SNORA59B-202ENST00000578183 701 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AC091135.1-201ENST00000585943 307 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AL353149.1-201ENST00000610667 244 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 AC106754.2-201ENST00000623006 233 ntBASIC-0.27□□□□□ -2.45
SCAPERQ9BY12 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 RNU6-72P-201ENST00000384285 79 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 SNORD41-201ENST00000386967 70 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 snoU109.2-201ENST00000459316 135 ntBASIC-0.28□□□□□ -2.45
SCAPERQ9BY12 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms