Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AK3P2-201ENST00000507976 429 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 RNU6-1041P-201ENST00000516254 102 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 RNA5SP503-201ENST00000517047 117 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AC015688.6-201ENST00000577737 104 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL022161.1-201ENST00000604390 213 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 uc_338.11-201ENST00000619132 160 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AC136475.10-201ENST00000620253 385 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 MIR8065-201ENST00000620577 100 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 MTND4P4-201ENST00000439033 1366 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RNU6-1097P-201ENST00000363586 107 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 SNORA63D-201ENST00000364359 132 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RNU6-877P-201ENST00000383868 107 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 Y_RNA.504-201ENST00000384481 104 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RNU4-46P-201ENST00000410818 138 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RPS3AP3-201ENST00000411933 242 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 Z99497.1-201ENST00000421282 135 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 SNX2P2-201ENST00000424553 323 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RPL23AP95-201ENST00000426806 265 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 SNAP23P1-201ENST00000433229 246 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC132479.1-201ENST00000449160 144 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RPS29P29-201ENST00000456396 171 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC007547.1-201ENST00000462177 490 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC010531.2-201ENST00000465012 153 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AL163973.1-201ENST00000484753 577 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC079382.1-201ENST00000493346 557 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC008628.2-201ENST00000502605 298 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC090821.2-201ENST00000523552 176 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC090115.3-201ENST00000553218 849 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 CYP3A52P-201ENST00000563326 91 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC090517.1-201ENST00000569307 266 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 Z98751.3-201ENST00000604447 521 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC064807.4-201ENST00000607201 407 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 AC022418.1-201ENST00000624118 445 ntBASIC0.81□□□□□ -2.28
UPK3BQ9BT76 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
UPK3BQ9BT76 RNU1-76P-201ENST00000362903 159 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 Y_RNA.164-201ENST00000363709 102 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 RNU6-53P-201ENST00000365367 106 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 RNU6-74P-201ENST00000384235 107 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 RNU6-331P-201ENST00000384724 107 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 SNORD70.1-201ENST00000391007 85 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 MIR208B-201ENST00000401172 77 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 COX6CP10-201ENST00000416832 224 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AL117339.3-201ENST00000418733 162 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 ISCA1P6-201ENST00000427740 390 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 MTCYBP1-201ENST00000454315 1119 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 snoU13.27-201ENST00000459278 104 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC103996.1-201ENST00000555468 102 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC109446.2-201ENST00000567872 497 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 TMF1P1-201ENST00000576058 373 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC004223.4-201ENST00000612426 332 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC016597.2-201ENST00000613256 341 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 MIR8070-201ENST00000616510 88 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AL136221.1-201ENST00000621449 509 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 AC091895.1-201ENST00000624494 256 ntBASIC0.8□□□□□ -2.28
UPK3BQ9BT76 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
UPK3BQ9BT76 RNU6-827P-201ENST00000365553 106 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 SNORA22-201ENST00000383907 134 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 RNU6-1029P-201ENST00000384109 107 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 SNORA22C-201ENST00000384614 134 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 MTND1P18-201ENST00000448191 573 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 RPS26P45-201ENST00000471748 340 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 HMGN1P7-201ENST00000491722 313 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 RNU7-40P-201ENST00000516397 64 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 MRPS36P3-201ENST00000519284 130 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AP003072.2-201ENST00000527756 676 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 SNORA59B-202ENST00000578183 701 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 RSL24D1P11-201ENST00000591045 491 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 Z84480.1-201ENST00000605131 311 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 MIR98-201ENST00000606724 119 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms