Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RNU2-61P-201ENST00000411069 191 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 Y_RNA.793-201ENST00000411222 111 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC009237.7-201ENST00000447357 229 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC140059.1-201ENST00000489238 361 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 RNU6-966P-201ENST00000516479 104 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 AP002001.1-203ENST00000534002 267 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC006380.1-201ENST00000603598 186 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 RMST_8.1-201ENST00000610287 165 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC099778.2-201ENST00000610904 211 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 AC068205.3-201ENST00000636385 468 ntBASIC3.51□□□□□ -1.85
TM9SF2Q99805 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF2Q99805 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF2Q99805 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF2Q99805 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF2Q99805 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF2Q99805 RNU6-1264P-201ENST00000383891 107 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 MIR200C-201ENST00000384980 68 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF2Q99805 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF2Q99805 RPL31P41-201ENST00000477967 372 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 SNORA27.4-201ENST00000516650 95 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 YPEL5P3-201ENST00000547227 352 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 AC074050.1-201ENST00000563247 211 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 MIR3145-201ENST00000580727 82 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 AC004792.1-201ENST00000614523 137 ntBASIC3.5□□□□□ -1.85
TM9SF2Q99805 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF2Q99805 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TM9SF2Q99805 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF2Q99805 MFSD8-236ENST00000641509 4050 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.49□□□□□ -1.85
TM9SF2Q99805 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF2Q99805 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF2Q99805 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF2Q99805 RNU6-486P-201ENST00000363116 107 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 MIR30B-201ENST00000384850 88 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.49□□□□□ -1.85
TM9SF2Q99805 RNU2-54P-201ENST00000410299 190 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF2Q99805 RPS29P26-201ENST00000477483 171 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.49□□□□□ -1.85
TM9SF2Q99805 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF2Q99805 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 AC024405.2-202ENST00000532731 184 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 MIR3158-1-201ENST00000583596 81 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF2Q99805 AC006133.1-201ENST00000617106 264 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
TM9SF2Q99805 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF2Q99805 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF2Q99805 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TM9SF2Q99805 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 AC091564.4-201ENST00000533934 2194 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TM9SF2Q99805 RNU1-75P-201ENST00000347264 129 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 MIR411-201ENST00000362239 96 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 RNU4-80P-201ENST00000363200 141 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 Y_RNA.122-201ENST00000363331 96 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 Y_RNA.292-201ENST00000364904 97 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 RNU6-1027P-201ENST00000383998 107 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 RNU6-662P-201ENST00000384253 104 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 RNU6-1289P-201ENST00000384431 106 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 MIR29B2-201ENST00000385055 81 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 RNU6-651P-201ENST00000411040 105 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 AC009963.1-201ENST00000417265 157 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 AL133547.1-201ENST00000448546 220 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 Y_RNA.644-201ENST00000459006 113 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 TRBV12-2-201ENST00000489763 344 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 SNORD116-28-201ENST00000516123 91 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 Y_RNA.674-201ENST00000516362 113 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF2Q99805 AC090877.1-201ENST00000561418 344 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
TM9SF2Q99805 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TM9SF2Q99805 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TM9SF2Q99805 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF2Q99805 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TM9SF2Q99805 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TM9SF2Q99805 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF2Q99805 UBE2WP1-201ENST00000362030 340 ntBASIC3.47□□□□□ -1.85
TM9SF2Q99805 RNU6-324P-201ENST00000363957 106 ntBASIC3.47□□□□□ -1.85
TM9SF2Q99805 Y_RNA.270-201ENST00000364693 104 ntBASIC3.47□□□□□ -1.85
TM9SF2Q99805 U8.12-201ENST00000384701 133 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms