Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AP000889.1-201ENST00000530968 660 ntBASIC1.81□□□□□ -2.12
PTP4A1Q93096 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.81□□□□□ -2.12
PTP4A1Q93096 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PTP4A1Q93096 AL157687.1-201ENST00000554853 619 ntBASIC1.81□□□□□ -2.12
PTP4A1Q93096 SUB1P4-201ENST00000566062 339 ntBASIC1.81□□□□□ -2.12
PTP4A1Q93096 AP005136.1-201ENST00000579765 429 ntBASIC1.81□□□□□ -2.12
PTP4A1Q93096 AC064836.2-201ENST00000609491 462 ntBASIC1.81□□□□□ -2.12
PTP4A1Q93096 AL121757.2-201ENST00000611223 313 ntBASIC1.81□□□□□ -2.12
PTP4A1Q93096 FER-210ENST00000628534 558 ntTSL 5 BASIC1.81□□□□□ -2.12
PTP4A1Q93096 MTND5P9-201ENST00000503854 1755 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 MIR320B2-201ENST00000408479 138 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 RN7SKP223-201ENST00000410582 62 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 RNU2-66P-201ENST00000410650 161 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 MTCO1P21-201ENST00000416634 589 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 USP9YP28-201ENST00000435142 589 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 SEPT14P3-201ENST00000439401 183 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AL732372.2-207ENST00000445840 183 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 MTND3P16-201ENST00000452205 344 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 SEPT14P2-201ENST00000453405 183 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 RPL9P6-201ENST00000492764 598 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 MTCO1P29-201ENST00000496868 288 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 RPL39P5-202ENST00000512505 151 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 SEPT14P4-201ENST00000513445 186 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 FO082796.1-201ENST00000523795 183 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 AL512360.1-201ENST00000555346 234 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AC100830.2-201ENST00000581636 240 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 Z99129.1-201ENST00000612510 255 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AC083806.3-201ENST00000614016 455 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AC137590.2-201ENST00000619709 240 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AL359880.1-201ENST00000621879 266 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
PTP4A1Q93096 AL159152.1-201ENST00000635019 2587 ntBASIC1.8□□□□□ -2.12
PTP4A1Q93096 AC121333.1-201ENST00000567488 2709 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PTP4A1Q93096 Y_RNA.51-201ENST00000362725 102 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 RNU6-1317P-201ENST00000364582 104 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 RNU6-1286P-201ENST00000383871 107 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 RNU6-968P-201ENST00000384076 107 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 RN7SKP32-201ENST00000410167 303 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 RPS26P42-201ENST00000413485 326 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 MTCO3P46-201ENST00000425787 232 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 ATP5J2P3-201ENST00000451550 258 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AC025465.3-201ENST00000510570 311 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.79□□□□□ -2.12
PTP4A1Q93096 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 Y_RNA.693-201ENST00000516641 110 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AC091544.4-201ENST00000555268 342 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AL118558.2-201ENST00000556294 238 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AC027807.1-201ENST00000559921 996 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.79□□□□□ -2.12
PTP4A1Q93096 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 MIR5094-201ENST00000578766 85 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 MIR4753-201ENST00000585119 83 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 AC069114.2-201ENST00000604699 304 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 MIR8074-201ENST00000615081 81 ntBASIC1.79□□□□□ -2.12
PTP4A1Q93096 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 SNORA29-201ENST00000384183 140 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 RNU6-648P-201ENST00000410190 107 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 FTH1P12-201ENST00000432137 551 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 HMGB1P18-201ENST00000438801 619 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AL357134.1-201ENST00000445848 426 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC074290.1-201ENST00000448883 135 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 RPS29P27-201ENST00000463711 170 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC087477.1-201ENST00000465747 340 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC114982.1-201ENST00000469402 321 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 RPL23AP94-201ENST00000512518 302 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 RNU6-835P-201ENST00000516974 104 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PTP4A1Q93096 HMGB1P33-201ENST00000563485 527 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 FGF7P1-201ENST00000582820 288 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC004492.1-201ENST00000607036 742 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC005562.2-201ENST00000618264 111 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
PTP4A1Q93096 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PTP4A1Q93096 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.78□□□□□ -2.12
PTP4A1Q93096 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 Y_RNA.123-201ENST00000363338 102 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 Y_RNA.231-201ENST00000364358 102 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 SNORA18.2-201ENST00000383865 132 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 SNORA67.3-201ENST00000384366 140 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms