Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AL079342.1-201ENST00000401460 267 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 RNU2-20P-201ENST00000410425 191 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AL139156.1-201ENST00000412785 841 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 RPL23AP94-201ENST00000512518 302 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 MIR2355-201ENST00000517199 87 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 AC091152.3-201ENST00000604227 325 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 BX284668.6-201ENST00000606899 438 ntBASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.13□□□□□ -1.91
SIMC1Q8NDZ2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 AL157777.2-201ENST00000258070 137 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-1266P-201ENST00000362794 105 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-78P-201ENST00000362897 107 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-72P-201ENST00000384285 79 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 Y_RNA.581-201ENST00000391017 97 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 Z82188.1-201ENST00000436709 154 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 AP001486.1-201ENST00000463339 476 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 FCF1P8-201ENST00000510322 597 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU5F-8P-201ENST00000515941 111 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-1012P-201ENST00000516606 109 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 SNORA31.18-201ENST00000517043 134 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 ACA59.2-201ENST00000517061 156 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-789P-201ENST00000517105 102 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 Y_RNA.772-201ENST00000606692 102 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 AC240442.1-201ENST00000616055 283 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 MIR6852-201ENST00000621699 66 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 AL035425.3-201ENST00000564206 4996 ntBASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIMC1Q8NDZ2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AC010329.5-201ENST00000623497 2174 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 Y_RNA.200-201ENST00000364018 102 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 Y_RNA.270-201ENST00000364693 104 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 RNU1-100P-201ENST00000365255 165 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-886P-201ENST00000384319 105 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 RNA5SP344-201ENST00000411081 104 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AL513477.1-202ENST00000417061 214 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AL591043.1-201ENST00000432461 424 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 TOMM22P6-201ENST00000465035 409 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 SCARNA24.2-201ENST00000516968 130 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AC023824.2-201ENST00000566185 400 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 MIR4643-201ENST00000577473 78 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 AC010928.2-201ENST00000588017 287 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-91P-201ENST00000607774 107 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 MIR8057-201ENST00000620957 69 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 MIR3529-201ENST00000637713 78 ntBASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SIMC1Q8NDZ2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-858P-201ENST00000362436 107 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-1301P-201ENST00000362724 104 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 SNORD113-8-201ENST00000363497 74 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 RNU6-937P-201ENST00000384325 106 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 RN7SKP111-201ENST00000410349 271 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 Y_RNA.602-201ENST00000410535 92 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AL358453.1-201ENST00000422522 250 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AC104332.1-201ENST00000440471 797 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AL392103.1-201ENST00000447000 198 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AL138752.1-201ENST00000452964 351 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 snoU13.30-201ENST00000458951 104 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 UBE2DNL-203ENST00000474922 222 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AC022868.1-201ENST00000517767 391 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 MRPS36P4-201ENST00000534436 298 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AC010186.2-204ENST00000537668 439 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 AC090617.3-201ENST00000573670 475 ntBASIC3.1□□□□□ -1.91
SIMC1Q8NDZ2 MIR4659A-201ENST00000580269 81 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms