Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 Z99497.1-201ENST00000421282 135 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 MRPL35P3-201ENST00000421557 364 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 RPL23AP95-201ENST00000426806 265 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL031274.1-201ENST00000450334 232 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL162395.1-201ENST00000457882 422 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 RPS23P5-201ENST00000495419 428 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AK3P2-201ENST00000507976 429 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC021231.3-201ENST00000558497 370 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC015688.6-201ENST00000577737 104 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 Z98751.3-201ENST00000604447 521 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 MIR3976-201ENST00000606807 139 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AC008250.2-201ENST00000615261 205 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL136221.1-201ENST00000621449 509 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 MTND4P4-201ENST00000439033 1366 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 RNU1-76P-201ENST00000362903 159 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 RNU6-1097P-201ENST00000363586 107 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 RNU6-378P-201ENST00000384324 107 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 RNU6-434P-201ENST00000384376 107 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 RNU6-393P-201ENST00000384475 107 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 MIR513A1-201ENST00000385138 129 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 RPS3AP3-201ENST00000411933 242 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AL593851.1-201ENST00000426171 157 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 PRPS1P1-201ENST00000445305 876 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 MTND1P18-201ENST00000448191 573 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 MTCYBP1-201ENST00000454315 1119 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC007547.1-201ENST00000462177 490 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC010531.2-201ENST00000465012 153 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 COX6CP14-201ENST00000469580 174 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC079382.1-201ENST00000493346 557 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 SNORD27.1-201ENST00000516319 72 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC109446.2-201ENST00000567872 497 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC090517.1-201ENST00000569307 266 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 MIR4775-201ENST00000581168 75 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 AC095038.3-201ENST00000634439 195 ntBASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
ZIC4Q8N9L1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 RNU6-108P-201ENST00000365558 107 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 Y_RNA.504-201ENST00000384481 104 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 MIR208B-201ENST00000401172 77 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 snoU13.27-201ENST00000459278 104 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 HMGN2P9-201ENST00000476875 229 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AL163195.1-201ENST00000496941 348 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 MRPS36P3-201ENST00000519284 130 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AP003465.2-201ENST00000602571 373 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AC064807.4-201ENST00000607201 407 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AC016597.2-201ENST00000613256 341 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 AC136475.10-201ENST00000620253 385 ntBASIC0.91□□□□□ -2.26
ZIC4Q8N9L1 RNU6-1029P-201ENST00000384109 107 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 RNU6-74P-201ENST00000384235 107 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 COX6CP10-201ENST00000416832 224 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 SNX2P2-201ENST00000424553 323 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 ISCA1P6-201ENST00000427740 390 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 MTCO2P6-201ENST00000463134 685 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AL163973.1-201ENST00000484753 577 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC008628.2-201ENST00000502605 298 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 RNU6-1041P-201ENST00000516254 102 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 RNU7-40P-201ENST00000516397 64 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 RNU6-856P-201ENST00000516959 98 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC069113.1-201ENST00000517763 267 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC090115.3-201ENST00000553218 849 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 TMF1P1-201ENST00000576058 373 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 RSL24D1P11-201ENST00000591045 491 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC092354.1-201ENST00000606057 376 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC009994.1-201ENST00000606889 253 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC006566.1-201ENST00000608943 513 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 AC005520.5-201ENST00000613926 164 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 MIR8065-201ENST00000620577 100 ntBASIC0.9□□□□□ -2.27
ZIC4Q8N9L1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms