Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNY4P6-201ENST00000363667 96 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 SNORA4.2-201ENST00000365313 147 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 RNU6-843P-201ENST00000384454 104 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC123900.1-201ENST00000420390 96 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 LARP1BP3-201ENST00000437229 869 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AL031313.1-201ENST00000448435 256 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 HMGB1P29-201ENST00000505659 499 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 RNU6-138P-201ENST00000515952 107 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC115990.1-201ENST00000526957 301 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 RNU6-549P-201ENST00000384433 107 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AL357312.1-201ENST00000603879 298 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC025449.1-201ENST00000603896 529 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 AC100814.1-201ENST00000606963 623 ntBASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.05□□□□□ -2.42
CSMD3Q7Z407 MTND4P5-201ENST00000435821 1374 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 RNU6-395P-201ENST00000365662 106 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 RNU6-46P-201ENST00000383860 107 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 RNU6-296P-201ENST00000384608 107 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AL359634.1-202ENST00000404721 284 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AL034345.1-201ENST00000407768 123 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 MTCO3P41-201ENST00000414801 328 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 ELOCP30-201ENST00000447108 299 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 ELOCP24-201ENST00000456370 334 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 RNU7-34P-201ENST00000459394 64 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 MED28P2-201ENST00000475771 317 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AC002350.1-201ENST00000490759 375 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 SNORD79.1-201ENST00000516069 84 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AC133794.1-201ENST00000602731 914 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AP002906.1-201ENST00000603405 233 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AL162730.1-201ENST00000605734 292 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 MIR8064-201ENST00000612863 90 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AC006026.2-201ENST00000457376 180 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AL078595.3-201ENST00000623815 1166 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AC132825.7-201ENST00000638744 335 ntBASIC-0.06□□□□□ -2.42
CSMD3Q7Z407 AC092268.1-201ENST00000342691 405 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 SNORD114-6-201ENST00000364393 72 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 SNORD114-3-201ENST00000364969 75 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RNU6-952P-201ENST00000391164 108 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC011233.1-201ENST00000422812 283 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AL139421.1-201ENST00000423010 169 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 MTCYBP39-201ENST00000437562 491 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RNU7-94P-201ENST00000459576 63 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RPL39P38-201ENST00000467018 153 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 MTND1P15-201ENST00000579262 949 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 MIR4431-201ENST00000579990 94 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AP000811.1-201ENST00000603803 651 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RPL17P51-201ENST00000605218 238 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC091304.9-201ENST00000612091 226 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AL136317.1-201ENST00000612653 226 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AL157786.1-207ENST00000627771 695 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC099654.9-201ENST00000637055 678 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC091860.1-201ENST00000505723 432 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 RNU6-863P-201ENST00000515989 104 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 uc_338.34-201ENST00000617467 174 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 MTND4P24-201ENST00000424002 397 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 AC009902.1-201ENST00000519351 183 ntBASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.07□□□□□ -2.42
CSMD3Q7Z407 MIR412-201ENST00000362142 91 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNU6-212P-201ENST00000362642 104 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL356583.2-201ENST00000426536 280 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC010469.2-201ENST00000496412 480 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 MTATP6P9-201ENST00000515039 680 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNU6-572P-201ENST00000516724 80 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC022868.1-201ENST00000517767 391 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 SUB1P2-201ENST00000556401 297 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 AL132657.2-201ENST00000564417 358 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.08□□□□□ -2.42
CSMD3Q7Z407 RNU6-40P-201ENST00000384254 107 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms